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Report for CCDS31212.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31212.1 Public Homo sapiens 10 NEUROG3 24 110 108 CCDS HistoryNCBI Gene:50674Re-query CCDS DB by CCDS ID:31212.1See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31212.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000242462.5 ENSP00000242462.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000242462.5Link to Ensembl Protein Viewer:ENSP00000242462.4Re-query CCDS DB by Nucleotide ID:ENST00000242462Re-query CCDS DB by Protein ID:ENSP00000242462
Original member Current member NCBI NM_020999.4 NP_066279.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020999.4Link to Protein Sequence:NP_066279.2Re-query CCDS DB by Nucleotide ID:NM_020999Re-query CCDS DB by Protein ID:NP_066279Link to BLAST:NP_066279.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_066279.2 214 Q9Y4Z2 214 100% 0 0

Chromosomal Locations for CCDS 31212.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 69572399 69573043 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (645 nt):
ATGACGCCTCAACCCTCGGGTGCGCCCACTGTCCAAGTGACCCGTGAGACGGAGCGGTCCTTCCCCAGAG
CCTCGGAAGACGAAGTGACCTGCCCCACGTCCGCCCCGCCCAGCCCCACTCGCACACGGGGGAACTGCGC
AGAGGCGGAAGAGGGAGGCTGCCGAGGGGCCCCGAGGAAGCTCCGGGCACGGCGCGGGGGACGCAGCCGG
CCTAAGAGCGAGTTGGCACTGAGCAAGCAGCGACGGAGTCGGCGAAAGAAGGCCAACGACCGCGAGCGCA
ATCGAATGCACAACCTCAACTCGGCACTGGACGCCCTGCGCGGTGTCCTGCCCACCTTCCCAGACGACGC
GAAGCTCACCAAGATCGAGACGCTGCGCTTCGCCCACAACTACATCTGGGCGCTGACTCAAACGCTGCGC
ATAGCGGACCACAGCTTGTACGCGCTGGAGCCGCCGGCGCCGCACTGCGGGGAGCTGGGCAGCCCAGGCG
GTTCCCCCGGGGACTGGGGGTCCCTCTACTCCCCAGTCTCCCAGGCTGGCAGCCTGAGTCCCGCCGCGTC
GCTGGAGGAGCGACCCGGGCTGCTGGGGGCCACCTTTTCCGCCTGCTTGAGCCCAGGCAGTCTGGCTTTC
TCAGATTTTCTGTGA

Translation (214 aa):
MTPQPSGAPTVQVTRETERSFPRASEDEVTCPTSAPPSPTRTRGNCAEAEEGGCRGAPRKLRARRGGRSR
PKSELALSKQRRSRRKKANDRERNRMHNLNSALDALRGVLPTFPDDAKLTKIETLRFAHNYIWALTQTLR
IADHSLYALEPPAPHCGELGSPGGSPGDWGSLYSPVSQAGSLSPAASLEERPGLLGATFSACLSPGSLAF
SDFL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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