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Report for CCDS11718.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11718.1 Public Homo sapiens 17 MRPS7 24 110 108 CCDS HistoryNCBI Gene:51081Re-query CCDS DB by CCDS ID:11718.1See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11718.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000245539.11 ENSP00000245539.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000245539.11Link to Ensembl Protein Viewer:ENSP00000245539.6Re-query CCDS DB by Nucleotide ID:ENST00000245539Re-query CCDS DB by Protein ID:ENSP00000245539
Original member Current member NCBI NM_015971.4 NP_057055.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015971.4Link to Protein Sequence:NP_057055.2Re-query CCDS DB by Nucleotide ID:NM_015971Re-query CCDS DB by Protein ID:NP_057055Link to BLAST:NP_057055.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_057055.2 242 Q9Y2R9 242 100% 0 0

Chromosomal Locations for CCDS 11718.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 75261901 75261983 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 75262497 75262688 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 75262804 75262867 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 75263340 75263507 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 75265702 75265923 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (729 nt):
ATGGCTGCCCCCGCAGTGAAGGTTGCCCGAGGATGGTCGGGCCTGGCGTTGGGCGTGCGGCGGGCTGTCT
TGCAGCTTCCAGGGCTAACTCAGGTGAGATGGAGCCGCTATAGTCCTGAATTCAAGGATCCCTTGATTGA
CAAGGAATATTATCGCAAGCCAGTGGAGGAGCTAACTGAGGAGGAGAAATATGTTCGGGAGCTCAAGAAG
ACTCAGCTCATCAAAGCTGCTCCAGCAGGGAAAACAAGTTCTGTGTTTGAAGACCCAGTCATCAGTAAAT
TCACCAACATGATGATGATAGGAGGAAACAAAGTACTGGCCAGATCCCTCATGATTCAGACTCTGGAAGC
TGTGAAAAGGAAGCAGTTTGAGAAGTACCATGCCGCTTCTGCAGAGGAACAGGCAACCATCGAACGCAAC
CCCTACACCATCTTCCATCAAGCACTGAAAAACTGTGAGCCTATGATTGGGCTGGTACCCATCCTCAAGG
GAGGCCGTTTCTACCAGGTCCCTGTACCCCTACCCGACCGGCGTCGCCGCTTCCTAGCCATGAAGTGGAT
GATCACTGAGTGCCGGGATAAAAAGCACCAGCGGACACTGATGCCGGAGAAGCTGTCACACAAGCTGCTG
GAGGCTTTCCATAACCAGGGCCCCGTGATCAAGAGGAAGCATGACTTGCACAAGATGGCAGAGGCCAACC
GTGCCCTGGCCCACTACCGCTGGTGGTAG

Translation (242 aa):
MAAPAVKVARGWSGLALGVRRAVLQLPGLTQVRWSRYSPEFKDPLIDKEYYRKPVEELTEEEKYVRELKK
TQLIKAAPAGKTSSVFEDPVISKFTNMMMIGGNKVLARSLMIQTLEAVKRKQFEKYHAASAEEQATIERN
PYTIFHQALKNCEPMIGLVPILKGGRFYQVPVPLPDRRRRFLAMKWMITECRDKKHQRTLMPEKLSHKLL
EAFHNQGPVIKRKHDLHKMAEANRALAHYRWW


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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