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Report for CCDS3145.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3145.1 Public Homo sapiens 3 COMMD2 24 110 108 CCDS HistoryNCBI Gene:51122Re-query CCDS DB by CCDS ID:3145.1See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 3145.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000473414.6 ENSP00000419475.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000473414.6Link to Ensembl Protein Viewer:ENSP00000419475.1Re-query CCDS DB by Nucleotide ID:ENST00000473414Re-query CCDS DB by Protein ID:ENSP00000419475
Original member Current member NCBI NM_016094.4 NP_057178.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_016094.4Link to Protein Sequence:NP_057178.2Re-query CCDS DB by Nucleotide ID:NM_016094Re-query CCDS DB by Protein ID:NP_057178Link to BLAST:NP_057178.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_057178.2 199 Q86X83-1 199 100% 0 0

Chromosomal Locations for CCDS 3145.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 149741521 149741718 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 149750678 149750851 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 149751403 149751485 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 149752210 149752287 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 149752378 149752444 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (600 nt):
ATGCTGCTGGAATTGTCCGAGGAGCATAAGGAACACCTGGCCTTCCTGCCTCAAGTGGACAGCGCGGTGG
TCGCCGAGTTTGGGCGGATTGCTGTGGAATTCCTGAGACGCGGCGCAAACCCAAAAATCTACGAAGGCGC
CGCCAGAAAACTCAATGTGAGTAGTGACACTGTCCAGCATGGTGTGGAAGGATTAACGTATCTCCTCACT
GAGAGCTCAAAGCTCATGATTTCTGAACTGGATTTCCAAGACTCTGTTTTTGTTCTGGGATTCTCTGAAG
AATTAAACAAATTGTTGCTTCAGCTTTATCTGGACAACAGAAAAGAGATCAGAACGATTCTGAGTGAATT
GGCACCAAGCCTTCCCAGTTATCATAACCTTGAATGGCGACTAGATGTACAGCTTGCAAGTAGAAGTCTC
AGGCAACAGATTAAACCAGCAGTGACTATAAAGCTACACCTTAATCAAAATGGAGATCACAACACCAAAG
TTCTGCAGACAGACCCAGCCACCCTGCTCCATTTGGTTCAACAACTGGAACAAGCATTGGAAGAGATGAA
GACAAATCACTGTAGGAGAGTTGTTCGCAACATCAAGTAG

Translation (199 aa):
MLLELSEEHKEHLAFLPQVDSAVVAEFGRIAVEFLRRGANPKIYEGAARKLNVSSDTVQHGVEGLTYLLT
ESSKLMISELDFQDSVFVLGFSEELNKLLLQLYLDNRKEIRTILSELAPSLPSYHNLEWRLDVQLASRSL
RQQIKPAVTIKLHLNQNGDHNTKVLQTDPATLLHLVQQLEQALEEMKTNHCRRVVRNIK


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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