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Report for CCDS9936.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9936.1 Public Homo sapiens 14 GLRX5 24 110 108 CCDS HistoryNCBI Gene:51218Re-query CCDS DB by CCDS ID:9936.1See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9936.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000331334.5 ENSP00000328570.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000331334.5Link to Ensembl Protein Viewer:ENSP00000328570.4Re-query CCDS DB by Nucleotide ID:ENST00000331334Re-query CCDS DB by Protein ID:ENSP00000328570
Original member Current member NCBI NM_016417.3 NP_057501.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_016417.3Link to Protein Sequence:NP_057501.2Re-query CCDS DB by Nucleotide ID:NM_016417Re-query CCDS DB by Protein ID:NP_057501Link to BLAST:NP_057501.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_057501.2 157 Q86SX6 157 100% 0 0

Chromosomal Locations for CCDS 9936.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 95535090 95535384 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 95543947 95544125 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (474 nt):
ATGAGCGGGTCCCTCGGCCGAGCTGCGGCGGCTCTGCTCCGCTGGGGGCGCGGCGCGGGCGGCGGTGGCC
TTTGGGGTCCGGGCGTGCGGGCGGCGGGCTCGGGCGCGGGCGGCGGCGGCTCGGCGGAGCAGTTGGACGC
GCTGGTGAAGAAGGACAAGGTGGTGGTCTTCCTCAAGGGGACGCCGGAGCAGCCCCAGTGCGGCTTCAGC
AACGCCGTGGTGCAGATCCTGCGGCTGCACGGCGTCCGCGATTACGCGGCCTACAACGTGCTGGACGACC
CGGAGCTCCGACAAGGCATTAAAGACTATTCCAACTGGCCCACCATCCCGCAAGTGTACCTCAATGGCGA
GTTTGTAGGGGGCTGTGACATTCTTCTGCAGATGCACCAGAATGGGGACTTGGTGGAAGAACTGAAAAAG
CTGGGGATCCACTCCGCCCTTTTAGATGAAAAGAAAGACCAAGACTCCAAGTGA

Translation (157 aa):
MSGSLGRAAAALLRWGRGAGGGGLWGPGVRAAGSGAGGGGSAEQLDALVKKDKVVVFLKGTPEQPQCGFS
NAVVQILRLHGVRDYAAYNVLDDPELRQGIKDYSNWPTIPQVYLNGEFVGGCDILLQMHQNGDLVEELKK
LGIHSALLDEKKDQDSK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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