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Report for CCDS12274.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12274.1 Public Homo sapiens 19 WDR83OS 24 110 108 CCDS HistoryNCBI Gene:51398Re-query CCDS DB by CCDS ID:12274.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12274.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000596731.7 ENSP00000468969.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000596731.7Link to Ensembl Protein Viewer:ENSP00000468969.1Re-query CCDS DB by Nucleotide ID:ENST00000596731Re-query CCDS DB by Protein ID:ENSP00000468969
Original member Current member NCBI NM_016145.4 NP_057229.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_016145.4Link to Protein Sequence:NP_057229.1Re-query CCDS DB by Nucleotide ID:NM_016145Re-query CCDS DB by Protein ID:NP_057229Link to BLAST:NP_057229.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_057229.1 106 Q9Y284 106 100% 0 0

Chromosomal Locations for CCDS 12274.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 12668359 12668425 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 12668520 12668617 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 12669128 12669233 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 12669354 12669403 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (321 nt):
ATGTCCACTAACAATATGTCGGACCCACGGAGGCCGAACAAAGTGCTGAGGTACAAGCCCCCGCCGAGCG
AATGTAACCCGGCCTTGGACGACCCGACGCCGGACTACATGAACCTGCTGGGCATGATCTTCAGCATGTG
CGGCCTCATGCTTAAGCTGAAGTGGTGTGCTTGGGTCGCTGTCTACTGCTCCTTCATCAGCTTTGCCAAC
TCTCGGAGCTCGGAGGACACGAAGCAAATGATGAGTAGCTTCATGCTGTCCATCTCTGCCGTGGTGATGT
CCTATCTGCAGAATCCTCAGCCCATGACGCCCCCATGGTGA

Translation (106 aa):
MSTNNMSDPRRPNKVLRYKPPPSECNPALDDPTPDYMNLLGMIFSMCGLMLKLKWCAWVAVYCSFISFAN
SRSSEDTKQMMSSFMLSISAVVMSYLQNPQPMTPPW


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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