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Report for CCDS5702.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5702.1 Public Homo sapiens 7 ACTL6B 24 110 108 CCDS HistoryNCBI Gene:51412Re-query CCDS DB by CCDS ID:5702.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5702.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000160382.10 ENSP00000160382.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000160382.10Link to Ensembl Protein Viewer:ENSP00000160382.5Re-query CCDS DB by Nucleotide ID:ENST00000160382Re-query CCDS DB by Protein ID:ENSP00000160382
Original member Current member NCBI NM_016188.5 NP_057272.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_016188.5Link to Protein Sequence:NP_057272.1Re-query CCDS DB by Nucleotide ID:NM_016188Re-query CCDS DB by Protein ID:NP_057272Link to BLAST:NP_057272.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_057272.1 426 O94805 426 100% 0 0

Chromosomal Locations for CCDS 5702.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 100643246 100643326 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100646249 100646335 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100646551 100646646 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100646751 100646831 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100646971 100647085 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100647223 100647284 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100647444 100647533 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100648556 100648662 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100648729 100648823 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100650038 100650135 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100655019 100655119 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100655421 100655586 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100655803 100655879 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100656330 100656354 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1281 nt):
ATGAGCGGGGGCGTCTACGGCGGAGATGAGGTGGGGGCGCTGGTCTTTGACATTGGCTCCTTCTCAGTCC
GCGCTGGGTACGCTGGGGAGGACTGTCCCAAGGCTGACTTCCCCACCACAGTGGGGCTGCTGGCCGCGGA
GGAGGGGGGCGGGCTGGAGCTGGAGGGGGACAAAGAGAAGAAAGGGAAGATCTTCCACATCGACACCAAT
GCCCTGCACGTGCCTCGGGATGGAGCGGAGGTCATGTCGCCCCTCAAGAATGGCATGATCGAGGACTGGG
AGTGCTTCCGAGCCATCCTGGATCACACCTACAGCAAACACGTCAAGTCTGAGCCAAACCTGCACCCAGT
GCTCATGTCCGAGGCTCCGTGGAACACACGGGCCAAGCGGGAGAAGCTGACAGAGCTGATGTTCGAGCAG
TACAACATTCCTGCCTTCTTCTTATGCAAGACGGCTGTGCTCACCGCCTTTGCAAACGGGCGGTCCACTG
GCCTCGTGCTGGACAGTGGAGCCACCCACACCACGGCCATTCCAGTACATGACGGCTACGTTCTGCAGCA
AGGCATCGTCAAGTCCCCTCTGGCAGGGGACTTCATCTCCATGCAGTGCCGGGAGCTGTTCCAGGAGATG
GCCATTGACATCATCCCACCTTACATGATCGCAGCCAAGGAGCCTGTCCGGGAGGGTGCCCCCCCAAACT
GGAAGAAGAAGGAGAAGCTACCCCAGGTCTCCAAGTCCTGGCATAACTACATGTGTAATGAGGTGATCCA
GGACTTCCAGGCCTCCGTGCTGCAGGTCTCAGACTCCCCCTACGATGAACAGGTGGCTGCACAAATGCCC
ACAGTGCACTACGAGATGCCCAATGGCTACAATACAGACTACGGCGCCGAGCGACTCCGCATCCCTGAGG
GCCTGTTTGATCCCTCGAACGTCAAGGGCCTGTCGGGGAACACCATGTTGGGTGTGGGCCACGTGGTGAC
CACCAGCATCGGCATGTGTGACATTGATATTCGCCCGGGCCTGTACGGGAGTGTCATTGTCACCGGCGGG
AACACACTGCTGCAGGGCTTCACTGACAGGCTCAATCGAGAGCTTTCCCAGAAGACCCCACCGAGCATGC
GACTGAAACTCATTGCCAGCAACAGCACCATGGAGCGCAAGTTCAGCCCCTGGATCGGGGGTTCCATCCT
GGCCTCACTGGGCACTTTCCAGCAGATGTGGATCTCCAAGCAGGAATATGAGGAGGGCGGGAAGCAGTGC
GTGGAGCGAAAGTGCCCCTGA

Translation (426 aa):
MSGGVYGGDEVGALVFDIGSFSVRAGYAGEDCPKADFPTTVGLLAAEEGGGLELEGDKEKKGKIFHIDTN
ALHVPRDGAEVMSPLKNGMIEDWECFRAILDHTYSKHVKSEPNLHPVLMSEAPWNTRAKREKLTELMFEQ
YNIPAFFLCKTAVLTAFANGRSTGLVLDSGATHTTAIPVHDGYVLQQGIVKSPLAGDFISMQCRELFQEM
AIDIIPPYMIAAKEPVREGAPPNWKKKEKLPQVSKSWHNYMCNEVIQDFQASVLQVSDSPYDEQVAAQMP
TVHYEMPNGYNTDYGAERLRIPEGLFDPSNVKGLSGNTMLGVGHVVTTSIGMCDIDIRPGLYGSVIVTGG
NTLLQGFTDRLNRELSQKTPPSMRLKLIASNSTMERKFSPWIGGSILASLGTFQQMWISKQEYEEGGKQC
VERKCP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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