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Report for CCDS12932.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12932.1 Public Homo sapiens 19 ZNF581 24 110 108 CCDS HistoryNCBI Gene:51545Re-query CCDS DB by CCDS ID:12932.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12932.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000270451.6 ENSP00000270451.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000270451.6Link to Ensembl Protein Viewer:ENSP00000270451.4Re-query CCDS DB by Nucleotide ID:ENST00000270451Re-query CCDS DB by Protein ID:ENSP00000270451
Original member Current member EBI ENST00000587252.5 ENSP00000466047.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000587252.5Link to Ensembl Protein Viewer:ENSP00000466047.1Re-query CCDS DB by Nucleotide ID:ENST00000587252Re-query CCDS DB by Protein ID:ENSP00000466047
Original member Current member EBI ENST00000588537.1 ENSP00000466564.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000588537.1Link to Ensembl Protein Viewer:ENSP00000466564.1Re-query CCDS DB by Nucleotide ID:ENST00000588537Re-query CCDS DB by Protein ID:ENSP00000466564
Original member Current member NCBI NM_016535.4 NP_057619.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_016535.4Link to Protein Sequence:NP_057619.1Re-query CCDS DB by Nucleotide ID:NM_016535Re-query CCDS DB by Protein ID:NP_057619Link to BLAST:NP_057619.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_057619.1 197 Q9P0T4 197 100% 0 0

Chromosomal Locations for CCDS 12932.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 55644572 55645165 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (594 nt):
ATGCTGGTGCTGCCATCCCCCTGCCCTCAGCCTCTGGCATTTTCCTCCGTTGAGACCATGGAGGGCCCTC
CCCGTCGGACTTGCCGCTCCCCAGAACCTGGACCTTCCTCCTCCATCGGATCTCCCCAGGCTTCATCTCC
TCCAAGGCCCAACCACTACCTGCTTATTGACACTCAGGGTGTCCCCTACACAGTGCTGGTGGACGAGGAG
TCACAGAGGGAGCCAGGGGCCAGTGGGGCTCCAGGCCAGAAAAAGTGCTACAGCTGCCCCGTGTGCTCAA
GGGTCTTCGAGTACATGTCCTACCTTCAGCGACACAGCATCACCCACTCGGAGGTAAAGCCCTTCGAGTG
TGACATCTGTGGGAAGGCATTCAAGCGCGCCAGCCACTTGGCACGGCACCATTCCATTCACCTGGCGGGT
GGTGGGCGGCCCCACGGCTGCCCGCTCTGCCCTCGCCGCTTCCGGGATGCGGGTGAGCTGGCCCAGCACA
GCCGGGTGCACTCTGGGGAACGCCCGTTTCAGTGTCCACACTGCCCTCGCCGCTTTATGGAGCAGAACAC
ACTGCAGAAACACACGCGGTGGAAGCATCCATGA

Translation (197 aa):
MLVLPSPCPQPLAFSSVETMEGPPRRTCRSPEPGPSSSIGSPQASSPPRPNHYLLIDTQGVPYTVLVDEE
SQREPGASGAPGQKKCYSCPVCSRVFEYMSYLQRHSITHSEVKPFECDICGKAFKRASHLARHHSIHLAG
GGRPHGCPLCPRRFRDAGELAQHSRVHSGERPFQCPHCPRRFMEQNTLQKHTRWKHP


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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