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Report for CCDS30582.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30582.1 Public Homo sapiens 1 PEX14 24 110 108 CCDS HistoryNCBI Gene:5195Re-query CCDS DB by CCDS ID:30582.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30582.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000356607.9 ENSP00000349016.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000356607.9Link to Ensembl Protein Viewer:ENSP00000349016.4Re-query CCDS DB by Nucleotide ID:ENST00000356607Re-query CCDS DB by Protein ID:ENSP00000349016
Original member Current member NCBI NM_004565.3 NP_004556.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_004565.3Link to Protein Sequence:NP_004556.1Re-query CCDS DB by Nucleotide ID:NM_004565Re-query CCDS DB by Protein ID:NP_004556Link to BLAST:NP_004556.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_004556.1 377 O75381-1 377 100% 0 0

Chromosomal Locations for CCDS 30582.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 10474967 10475002 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 10495274 10495321 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 10536213 10536297 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 10599238 10599366 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 10618332 10618417 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 10623019 10623121 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 10624340 10624437 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 10627272 10627363 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 10629531 10629987 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1134 nt):
ATGGCGTCCTCGGAGCAGGCAGAGCAGCCGAGCCAGCCAAGCTCTACTCCAGGAAGTGAAAATGTGCTGC
CTCGAGAGCCGCTGATTGCCACGGCAGTGAAGTTTCTACAGAATTCCCGGGTCCGCCAGAGCCCACTTGC
AACCAGGAGAGCATTCCTAAAGAAGAAAGGGCTGACAGATGAAGAGATTGATATGGCCTTCCAGCAGTCG
GGCACTGCTGCCGATGAGCCTTCGTCCTTGGGCCCAGCCACACAGGTGGTTCCTGTCCAGCCCCCTCACC
TCATATCTCAGCCATACAGTCCCGCAGGCTCCCGATGGCGAGATTACGGCGCCCTGGCCATCATCATGGC
AGGCATTGCATTTGGCTTTCACCAGCTCTACAAGAAATACCTGCTCCCCCTCATCCTGGGCGGCCGAGAG
GACAGAAAGCAGCTGGAGAGGATGGAGGCCGGTCTCTCTGAGCTGAGTGGCAGCGTGGCCCAGACAGTGA
CTCAGTTACAGACGACCCTCGCCTCCGTCCAGGAGCTGCTGATTCAGCAGCAGCAGAAGATCCAGGAGCT
TGCCCACGAGCTGGCCGCTGCCAAGGCCACCACATCCACCAACTGGATCCTGGAGTCCCAGAATATCAAC
GAACTCAAGTCCGAAATTAACTCCTTGAAAGGGCTTCTTTTAAATCGGAGGCAGTTCCCTCCATCCCCAT
CAGCCCCGAAGATCCCCTCCTGGCAGATCCCAGTCAAGTCACCGTCACCCTCCAGCCCTGCGGCCGTGAA
CCACCACAGCAGCAGCGACATCTCACCTGTCAGCAACGAGTCCACGTCGTCCTCGCCTGGGAAGGAGGGC
CACAGCCCCGAGGGCTCCACGGTCACCTACCACTTGCTGGGCCCCCAGGAGGAAGGCGAGGGGGTGGTGG
ACGTCAAGGGCCAGGTGCGGATGGAGGTGCAAGGCGAGGAGGAGAAGAGGGAGGACAAGGAGGACGAGGA
GGATGAGGAGGATGATGATGTGAGCCATGTGGACGAGGAGGACTGCCTGGGGGTGCAGAGGGAGGACCGC
CGGGGCGGGGATGGGCAGATCAACGAGCAGGTGGAGAAGCTGCGGCGGCCCGAGGGCGCCAGCAACGAGA
GTGAGCGGGACTAG

Translation (377 aa):
MASSEQAEQPSQPSSTPGSENVLPREPLIATAVKFLQNSRVRQSPLATRRAFLKKKGLTDEEIDMAFQQS
GTAADEPSSLGPATQVVPVQPPHLISQPYSPAGSRWRDYGALAIIMAGIAFGFHQLYKKYLLPLILGGRE
DRKQLERMEAGLSELSGSVAQTVTQLQTTLASVQELLIQQQQKIQELAHELAAAKATTSTNWILESQNIN
ELKSEINSLKGLLLNRRQFPPSPSAPKIPSWQIPVKSPSPSSPAAVNHHSSSDISPVSNESTSSSPGKEG
HSPEGSTVTYHLLGPQEEGEGVVDVKGQVRMEVQGEEEKREDKEDEEDEEDDDVSHVDEEDCLGVQREDR
RGGDGQINEQVEKLRRPEGASNESERD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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