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Report for CCDS44896.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44896.1 Public Homo sapiens 12 ZNF740 24 110 108 CCDS HistoryNCBI Gene:283337Re-query CCDS DB by CCDS ID:44896.1Re-query CCDS DB by GeneID:283337See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44896.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000416904.5 ENSP00000409463.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000416904.5Link to Ensembl Protein Viewer:ENSP00000409463.2Re-query CCDS DB by Nucleotide ID:ENST00000416904Re-query CCDS DB by Protein ID:ENSP00000409463
Original member Current member NCBI NM_001004304.4 NP_001004304.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001004304.4Link to Protein Sequence:NP_001004304.1Re-query CCDS DB by Nucleotide ID:NM_001004304Re-query CCDS DB by Protein ID:NP_001004304Link to BLAST:NP_001004304.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001004304.1 193 Q8NDX6 193 100% 0 0

Chromosomal Locations for CCDS 44896.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 53181984 53181992 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 53184891 53185040 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 53185387 53185476 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 53185954 53186077 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 53186391 53186509 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 53187501 53187590 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (582 nt):
ATGGCTCAGGCAAGTCTCCTGGCTTGTGAAGGCCTAGCAGGTGTGAGTTTGGTTCCCACTGCAGCCAGCA
AGAAGATGATGCTGAGCCAGATTGCCAGCAAGCAGGCCGAGAATGGCGAGCGGGCAGGTAGCCCTGATGT
GCTGAGGTGCTCGAGTCAGGGTCACCGAAAAGACAGTGATAAGTCCCGGAGCCGCAAAGATGATGACAGC
TTGTCTGAGGCCTCTCATTCAAAAAAGACTGTTAAAAAGGTGGTGGTAGTGGAACAAAATGGTTCTTTTC
AAGTAAAGATTCCCAAAAATTTTGTTTGTGAACACTGCTTTGGAGCCTTTCGGAGCAGTTACCACCTAAA
GAGGCACATCCTTATTCACACTGGTGAGAAGCCATTTGAATGCGATATATGTGATATGCGTTTCATCCAG
AAGTACCACCTGGAACGCCACAAGCGTGTGCACAGTGGTGAAAAGCCTTACCAGTGTGAACGGTGTCATC
AGTGTTTTTCTCGGACAGATCGATTACTCAGACACAAACGGATGTGCCAAGGGTGCCAGTCCAAGACTTC
CGACGGGCAGTTTTCTCTATAG

Translation (193 aa):
MAQASLLACEGLAGVSLVPTAASKKMMLSQIASKQAENGERAGSPDVLRCSSQGHRKDSDKSRSRKDDDS
LSEASHSKKTVKKVVVVEQNGSFQVKIPKNFVCEHCFGAFRSSYHLKRHILIHTGEKPFECDICDMRFIQ
KYHLERHKRVHSGEKPYQCERCHQCFSRTDRLLRHKRMCQGCQSKTSDGQFSL


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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