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Report for CCDS30910.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30910.1 Public Homo sapiens 1 OR10J5 24 110 108 CCDS HistoryNCBI Gene:127385Re-query CCDS DB by CCDS ID:30910.1Re-query CCDS DB by GeneID:127385See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 30910.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000334857.3 ENSP00000334441.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000334857.3Link to Ensembl Protein Viewer:ENSP00000334441.2Re-query CCDS DB by Nucleotide ID:ENST00000334857Re-query CCDS DB by Protein ID:ENSP00000334441
Original member Current member NCBI NM_001004469.1 NP_001004469.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001004469.1Link to Protein Sequence:NP_001004469.1Re-query CCDS DB by Nucleotide ID:NM_001004469Re-query CCDS DB by Protein ID:NP_001004469Link to BLAST:NP_001004469.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001004469.1 309 Q8NHC4 309 100% 0 0

Chromosomal Locations for CCDS 30910.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 159535078 159536007 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (930 nt):
ATGAAGAGAAAGAACTTCACAGAAGTGTCAGAATTCATTTTCTTGGGATTTTCTAGCTTTGGAAAGCATC
AGATAACCCTCTTTGTGGTTTTCCTAACTGTCTACATTTTAACTCTGGTTGCTAACATCATCATTGTGAC
TATCATCTGCATTGACCATCATCTCCACACTCCCATGTATTTCTTCCTAAGCATGCTGGCTAGTTCAGAG
ACGGTGTACACACTGGTCATTGTGCCACGAATGCTTTTGAGCCTCATTTTTCATAACCAACCTATCTCCT
TGGCAGGCTGTGCTACACAAATGTTCTTTTTTGTTATCTTGGCCACTAATAATTGCTTCCTGCTTACTGC
AATGGGGTATGACCGCTATGTGGCCATCTGCAGACCCCTGAGATACACTGTCATCATGAGCAAGGGACTA
TGTGCCCAGCTGGTGTGTGGGTCCTTTGGCATTGGTCTGACTATGGCAGTTCTCCATGTGACAGCCATGT
TCAATTTGCCGTTCTGTGGCACAGTGGTAGACCACTTCTTTTGTGACATTTACCCAGTCATGAAACTTTC
TTGCATTGATACCACTATCAATGAGATAATAAATTATGGTGTAAGTTCATTTGTGATTTTTGTGCCCATA
GGCCTGATATTTATCTCCTATGTCCTTGTCATCTCTTCCATCCTTCAAATTGCCTCAGCTGAGGGCCGGA
AGAAGACCTTTGCCACCTGTGTCTCCCACCTCACTGTGGTTATTGTCCACTGTGGCTGTGCCTCCATTGC
CTACCTCAAGCCGAAGTCAGAAAGTTCAATAGAAAAAGACCTTGTTCTCTCAGTGACGTACACCATCATC
ACTCCCTTGCTGAACCCTGTTGTTTACAGTCTGAGAAACAAGGAGGTAAAGGATGCCCTATGCAGAGTTG
TGGGCAGAAATATTTCTTAA

Translation (309 aa):
MKRKNFTEVSEFIFLGFSSFGKHQITLFVVFLTVYILTLVANIIIVTIICIDHHLHTPMYFFLSMLASSE
TVYTLVIVPRMLLSLIFHNQPISLAGCATQMFFFVILATNNCFLLTAMGYDRYVAICRPLRYTVIMSKGL
CAQLVCGSFGIGLTMAVLHVTAMFNLPFCGTVVDHFFCDIYPVMKLSCIDTTINEIINYGVSSFVIFVPI
GLIFISYVLVISSILQIASAEGRKKTFATCVSHLTVVIVHCGCASIAYLKPKSESSIEKDLVLSVTYTII
TPLLNPVVYSLRNKEVKDALCRVVGRNIS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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