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Report for CCDS31518.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31518.1 Public Homo sapiens 11 OR8H2 24 110 108 CCDS HistoryNCBI Gene:390151Re-query CCDS DB by CCDS ID:31518.1Re-query CCDS DB by GeneID:390151See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31518.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000313503.2 ENSP00000323982.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000313503.2Link to Ensembl Protein Viewer:ENSP00000323982.1Re-query CCDS DB by Nucleotide ID:ENST00000313503Re-query CCDS DB by Protein ID:ENSP00000323982
Original member Current member EBI ENST00000641311.1 ENSP00000493031.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000641311.1Link to Ensembl Protein Viewer:ENSP00000493031.1Re-query CCDS DB by Nucleotide ID:ENST00000641311Re-query CCDS DB by Protein ID:ENSP00000493031
Original member Current member NCBI NM_001005200.2 NP_001005200.1 Accepted alive Link to Nucleotide Sequence:NM_001005200.2Link to Protein Sequence:NP_001005200.1Re-query CCDS DB by Nucleotide ID:NM_001005200Re-query CCDS DB by Protein ID:NP_001005200Link to BLAST:NP_001005200.1
Original member Current member NCBI NM_001386064.1 NP_001372993.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001386064.1Link to Protein Sequence:NP_001372993.1Re-query CCDS DB by Nucleotide ID:NM_001386064Re-query CCDS DB by Protein ID:NP_001372993Link to BLAST:NP_001372993.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001005200.1 312 Q8N162 312 100% 0 0
NP_001372993.1 312 Q8N162 312 100% 0 0

Chromosomal Locations for CCDS 31518.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 56105043 56105981 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (939 nt):
ATGATGGGTAGAAGGAATAACACAAATGTGGCTGACTTCATCCTTATGGGACTGACACTTTCTGAAGAGA
TCCAGATGGCTCTGTTTATGCTATTTCTCCTGATATACCTAATTACTATGCTGGGGAATGTGGGGATGAT
ATTGATAATCCGCCTGGACCTCCAGCTTCACACTCCCATGTATTTTTTCCTTACTCACCTGTCATTTATT
GACCTCAGTTACTCAACTGTCGTCACACCTAAAACCTTAGCGAACTTACTGACTTCCAACTATATTTCCT
TTACGGGCTGCTTTGCCCAGATGTTCTTTTTTGCCTTCTTGGGTACTGCTGAATGTTACCTTCTCTCCTC
AATGGCCCATGATCGCTATGCAGCGATCTGCAGTCCTCTACACTACACAGTTATTATGTCCAAAAGGCTC
TGCCTCGCTCTCATCACTGGGCCTTATGTGATTGGCTTTATAGACTCCTTTGTCAACGTGGTTTCCATGA
GCAGATTGCATTTCTACGACTCAAACGTAATTCATCACTTTTTCTGTGACACTTCCCCAATTTTAGCTCT
GTCCTGCACTGATACATACAACACCGAAATCCTGATATTCATTATTGTTGGTTCCACCCTGATGGTGTCC
CTTTTCACAATATCTGCATCCTATGTGTTCATTCTCTTTACCATCCTGAAAATTAATTCCACTTCAGGAA
AGCAGAAAGCTTTCTCTACTTGCGTCTCTCATCTCTTGGGAGTCACCATCTTTTATAGCACTCTGATTTT
TACTTATTTAAAACCAAGAAAGTCTTATTCCTTGGGAAGAGATCAAGTGGCTTCTGTTTTTTATACTATT
GTGATTCCCGTGCTGAATCCACTCATTTATAGTCTTAGAAACAAAGAGGTGAAAAATGCTGTCATCAGAG
TCATGCAGAGAAGACAGGACTCCAGGTAA

Translation (312 aa):
MMGRRNNTNVADFILMGLTLSEEIQMALFMLFLLIYLITMLGNVGMILIIRLDLQLHTPMYFFLTHLSFI
DLSYSTVVTPKTLANLLTSNYISFTGCFAQMFFFAFLGTAECYLLSSMAHDRYAAICSPLHYTVIMSKRL
CLALITGPYVIGFIDSFVNVVSMSRLHFYDSNVIHHFFCDTSPILALSCTDTYNTEILIFIIVGSTLMVS
LFTISASYVFILFTILKINSTSGKQKAFSTCVSHLLGVTIFYSTLIFTYLKPRKSYSLGRDQVASVFYTI
VIPVLNPLIYSLRNKEVKNAVIRVMQRRQDSR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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