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Report for CCDS45746.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45746.1 Public Homo sapiens 17 TRIM37 24 110 108 CCDS HistoryNCBI Gene:4591Re-query CCDS DB by CCDS ID:45746.1Re-query CCDS DB by GeneID:4591See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45746.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000393066.7 ENSP00000376785.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000393066.7Link to Ensembl Protein Viewer:ENSP00000376785.3Re-query CCDS DB by Nucleotide ID:ENST00000393066Re-query CCDS DB by Protein ID:ENSP00000376785
Original member Current member NCBI NM_001005207.5 NP_001005207.1 Accepted alive Link to Nucleotide Sequence:NM_001005207.5Link to Protein Sequence:NP_001005207.1Re-query CCDS DB by Nucleotide ID:NM_001005207Re-query CCDS DB by Protein ID:NP_001005207Link to BLAST:NP_001005207.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001005207.1 964 O94972-1 964 100% 0 0

Chromosomal Locations for CCDS 45746.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 58982918 58982921 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 58999381 58999459 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 59001598 59001714 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 59012328 59012446 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 59015610 59015799 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 59017296 59017424 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 59028415 59028723 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 59031896 59032090 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 59041813 59041898 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 59047683 59047819 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 59049178 59049393 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 59051214 59051328 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 59056875 59057054 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 59061032 59061108 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 59062567 59062648 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 59064355 59064405 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 59070823 59070947 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 59075647 59075714 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 59079754 59079877 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 59081097 59081219 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 59084002 59084089 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 59088291 59088407 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 59091300 59091340 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 59104293 59104394 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 59106441 59106461 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2895 nt):
ATGGATGAACAGAGCGTGGAGAGCATTGCTGAGGTTTTCCGATGTTTCATTTGTATGGAGAAATTGCGGG
ATGCACGCCTGTGTCCTCATTGCTCCAAACTGTGTTGTTTCAGCTGTATTAGGCGCTGGCTGACAGAGCA
GAGAGCTCAATGTCCTCATTGCCGTGCTCCACTCCAGCTACGAGAACTAGTAAATTGTCGTTGGGCAGAA
GAAGTAACACAACAGCTTGATACTCTTCAACTCTGCAGTCTCACCAAACATGAAGAAAATGAAAAGGACA
AATGTGAAAATCACCATGAAAAACTTAGTGTATTTTGCTGGACTTGTAAGAAGTGTATCTGCCATCAGTG
TGCACTTTGGGGAGGAATGCATGGCGGACATACCTTTAAACCTTTGGCAGAAATTTATGAGCAACACGTC
ACTAAAGTGAATGAAGAGGTAGCCAAACTTCGTCGGCGTCTCATGGAACTGATCAGCTTAGTTCAAGAAG
TGGAAAGGAATGTAGAAGCTGTAAGAAATGCAAAAGATGAGCGTGTTCGGGAAATTAGGAATGCAGTGGA
GATGATGATTGCACGGTTAGACACACAGCTGAAGAATAAGCTTATAACACTGATGGGTCAGAAGACATCT
CTAACCCAAGAAACAGAGCTTTTGGAATCCTTACTTCAGGAGGTGGAGCACCAGTTGCGGTCTTGTAGTA
AGAGTGAGTTGATATCTAAGAGCTCAGAGATCCTTATGATGTTTCAGCAAGTTCATCGGAAGCCCATGGC
ATCTTTTGTTACCACTCCTGTTCCACCAGACTTTACCAGTGAATTAGTGCCATCTTACGATTCAGCTACT
TTTGTTTTAGAGAATTTCAGCACTTTGCGTCAGAGAGCAGATCCTGTTTACAGTCCACCTCTTCAAGTTT
CAGGACTTTGCTGGAGGTTAAAAGTTTACCCAGATGGAAATGGAGTTGTGCGAGGTTACTACTTATCTGT
GTTTCTGGAGCTCTCAGCTGGCTTGCCTGAAACTTCTAAATATGAATATCGTGTAGAGATGGTTCACCAG
TCCTGTAATGATCCTACAAAAAATATCATTCGAGAATTTGCATCTGACTTTGAAGTTGGAGAATGCTGGG
GCTATAATAGATTTTTCCGTTTGGACTTACTCGCAAATGAAGGATACTTGAATCCACAAAATGATACAGT
GATTTTAAGGTTTCAGGTACGTTCACCAACTTTCTTTCAAAAATCCCGGGACCAGCATTGGTACATTACT
CAGTTGGAAGCTGCACAGACTAGTTATATCCAACAAATAAACAACCTTAAAGAGAGACTTACTATTGAGC
TGTCTCGAACTCAGAAGTCAAGAGATTTGTCACCACCAGATAACCATCTTAGCCCCCAAAATGATGATGC
TCTGGAGACACGAGCTAAGAAGTCTGCATGCTCTGACATGCTTCTCGAAGGTGGTCCTACTACAGCTTCT
GTAAGAGAGGCCAAAGAGGATGAAGAAGATGAGGAGAAGATTCAGAATGAAGATTATCATCACGAGCTTT
CAGATGGAGATCTGGATCTGGATCTTGTTTATGAGGATGAAGTAAATCAGCTCGATGGCAGCAGTTCCTC
TGCTAGTTCCACAGCAACAAGTAATACAGAAGAAAATGATATTGATGAAGAAACTATGTCTGGAGAAAAT
GATGTGGAATATAACAACATGGAATTAGAAGAGGGAGAACTCATGGAAGATGCAGCTGCTGCAGGACCCG
CAGGTAGTAGCCATGGTTATGTGGGTTCCAGTAGTAGAATATCAAGAAGAACACATTTATGCTCCGCTGC
TACCAGTAGTTTACTAGACATTGATCCATTAATTTTAATACATTTGTTGGACCTTAAGGACCGGAGCAGT
ATAGAAAATTTGTGGGGCTTACAGCCTCGCCCACCTGCTTCACTTCTGCAGCCCACAGCATCATATTCTC
GAAAAGATAAAGACCAAAGGAAGCAACAGGCAATGTGGCGAGTGCCCTCTGATTTAAAGATGCTAAAAAG
ACTCAAAACTCAAATGGCCGAAGTTCGATGTATGAAAACTGATGTAAAGAATACACTTTCAGAAATAAAA
AGCAGCAGTGCTGCTTCTGGAGACATGCAGACAAGCCTTTTTTCTGCTGACCAGGCAGCTCTGGCTGCAT
GTGGAACTGAAAACTCTGGCAGATTGCAGGATTTGGGAATGGAACTCCTGGCAAAGTCATCAGTTGCCAA
TTGTTACATACGAAACTCCACAAATAAGAAGAGTAATTCGCCCAAGCCAGCTCGATCCAGTGTAGCAGGT
AGTCTATCACTTCGAAGAGCAGTGGACCCTGGAGAAAATAGTCGTTCAAAGGGAGACTGTCAGACTCTGT
CTGAAGGCTCCCCAGGAAGCTCTCAGTCTGGGAGCAGGCACAGTTCTCCCCGAGCCTTGATACATGGCAG
TATCGGTGATATTCTGCCAAAAACTGAAGACCGGCAGTGTAAAGCTTTGGATTCAGATGCTGTTGTGGTT
GCAGTTTTCAGTGGCTTGCCTGCGGTTGAGAAAAGGAGGAAAATGGTCACCTTGGGGGCTAATGCTAAAG
GAGGTCATCTGGAAGGACTGCAGATGACTGATTTGGAAAATAATTCTGAAACTGGAGAGTTACAGCCTGT
ACTACCTGAAGGAGCTTCAGCTGCCCCTGAAGAAGGAATGAGTAGCGACAGTGACATTGAATGTGACACT
GAGAATGAGGAGCAGGAAGAGCATACCAGTGTGGGCGGGTTTCACGACTCCTTCATGGTCATGACACAGC
CCCCGGATGAAGATACACATTCCAGTTTTCCTGATGGTGAACAAATAGGCCCTGAAGATCTCAGCTTCAA
TACAGATGAAAATAGTGGAAGATAA

Translation (964 aa):
MDEQSVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQLRELVNCRWAE
EVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALWGGMHGGHTFKPLAEIYEQHV
TKVNEEVAKLRRRLMELISLVQEVERNVEAVRNAKDERVREIRNAVEMMIARLDTQLKNKLITLMGQKTS
LTQETELLESLLQEVEHQLRSCSKSELISKSSEILMMFQQVHRKPMASFVTTPVPPDFTSELVPSYDSAT
FVLENFSTLRQRADPVYSPPLQVSGLCWRLKVYPDGNGVVRGYYLSVFLELSAGLPETSKYEYRVEMVHQ
SCNDPTKNIIREFASDFEVGECWGYNRFFRLDLLANEGYLNPQNDTVILRFQVRSPTFFQKSRDQHWYIT
QLEAAQTSYIQQINNLKERLTIELSRTQKSRDLSPPDNHLSPQNDDALETRAKKSACSDMLLEGGPTTAS
VREAKEDEEDEEKIQNEDYHHELSDGDLDLDLVYEDEVNQLDGSSSSASSTATSNTEENDIDEETMSGEN
DVEYNNMELEEGELMEDAAAAGPAGSSHGYVGSSSRISRRTHLCSAATSSLLDIDPLILIHLLDLKDRSS
IENLWGLQPRPPASLLQPTASYSRKDKDQRKQQAMWRVPSDLKMLKRLKTQMAEVRCMKTDVKNTLSEIK
SSSAASGDMQTSLFSADQAALAACGTENSGRLQDLGMELLAKSSVANCYIRNSTNKKSNSPKPARSSVAG
SLSLRRAVDPGENSRSKGDCQTLSEGSPGSSQSGSRHSSPRALIHGSIGDILPKTEDRQCKALDSDAVVV
AVFSGLPAVEKRRKMVTLGANAKGGHLEGLQMTDLENNSETGELQPVLPEGASAAPEEGMSSDSDIECDT
ENEEQEEHTSVGGFHDSFMVMTQPPDEDTHSSFPDGEQIGPEDLSFNTDENSGR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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