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Report for CCDS26211.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26211.1 Public Mus musculus 12 Esyt2 23 108 98 CCDS HistoryNCBI Gene:52635Re-query CCDS DB by CCDS ID:26211.1See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26211.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000100986.3 ENSMUSP00000098548.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000100986.3Link to Ensembl Protein Viewer:ENSMUSP00000098548.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000100986Re-query CCDS DB by Protein ID:ENSMUSP00000098548
Original member Current member EBI ENSMUST00000220816.1 ENSMUSP00000152444.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000220816.1Link to Ensembl Protein Viewer:ENSMUSP00000152444.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000220816Re-query CCDS DB by Protein ID:ENSMUSP00000152444
Original member Current member NCBI NM_028731.5 NP_083007.2 Accepted alive Link to Nucleotide Sequence:NM_028731.5Link to Protein Sequence:NP_083007.2Re-query CCDS DB by Nucleotide ID:NM_028731Re-query CCDS DB by Protein ID:NP_083007Link to BLAST:NP_083007.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_083007.2 845 Q3TZZ7-1 845 100% 0 0

Chromosomal Locations for CCDS 26211.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 12 (NC_000078.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 116281343 116281672 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 116317830 116317871 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 116318804 116318938 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 116321127 116321203 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 116323840 116323912 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 116324121 116324210 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 116334201 116334256 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 116339547 116339667 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 116342076 116342252 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 116343438 116343520 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 116346504 116346552 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 116347726 116347815 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 116348219 116348314 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 116357112 116357186 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 116357848 116357934 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 116363395 116363544 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 116365555 116365928 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 116366930 116367028 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 116367708 116367839 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 116368736 116368841 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 116370012 116370061 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 116370171 116370216 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2538 nt):
ATGAGTAGCGCGGGGGGCGAGGGGCCGGAGGCCGGTCCTGGCCGGGCTGGGGGCCGCTCCGAGCCCGAGG
CCCCGGGCAGCGCTCTGAGTGTGGACTTGCCGGGGCTGCTGGGGCAGCTGGCGCGCAGCTTCGCGCTGCT
GCTGCCGGTGTACGCCCTGGGCTACCTGGGGCTGAGCTTCAGTTGGGTGCTGCTGGCGCTCGGGCTGCTC
GCCTGGTGCCGCCGGAGCCGCGGCCTCAAGGCCAGCCGCCTGTGCCGCGCGCTGGCGCTGTTGGAGGACG
AGGAGCAAGCTGTGCGCCTGGGAGTGCGCGCCTGCGACCTGCCCGCCTGGGTTCATTTTCCAGACACTGA
AAGAGCAGAATGGCTAAATAAGACTGTAAAGCACATGTGGCCCTTTATTTGTCAGTTTATCGAGAAGCTC
TTTCGAGAAACCATAGAGCCAGCTGTGCGTGGAGCAAATGCTCACCTCAGCACCTTCAGCTTCACAAAAG
TGGATGTGGGTCAGCAGCCCCTGAGAGTCAATGGTGTTAAGGTTTATACTGAAAATGTAGACAAAAGACA
AATTATTCTGGACCTTCAGATTAGTTTTGTAGGAAATTGTGAGATTGATTTGGAGATCAAAAGATATTTT
TGTAGAGCTGGTGTGAAAAGTATTCAGATCCATGGGACAATGCGGGTGATACTGGAGCCCCTGATTGGAG
ACATGCCTTTAGTTGGAGCTTTGTCCATCTTCTTCCTTAGGAAACCACTTTTAGAGATTAACTGGACAGG
GCTGACTAACCTTCTGGACATCCCTGGACTGAATGGTTTATCTGATACTATCATTTTGGATATAATATCA
AACTATCTAGTGCTTCCCAATCGAATCACCGTTCCTCTTGTCAGTGAAGTTCAAATAGCTCAGCTGCGGT
TTCCCATACCAAAGGGTGTCCTAAGGATTCACTTTATTGAAGCTCAAGATCTTCAGGGCAAAGACACCTA
CCTTAAAGGCCTTGTCAAGGGAAAATCAGACCCCTATGGAATTATCCGGGTGGGCAACCAAATCTTCCAG
AGCAAAGTCATCAAAGAGAACCTTAGTCCAAAATGGAATGAAGTGTATGAGGCTTTAGTGTATGAACACC
CTGGACAAGAATTGGAGATTGAACTGTTTGATGAAGATCCAGACAAGGATGATTTCTTAGGAAGTCTTAT
GATTGATCTTATTGAAGTTGAGAAGGAGCGCCTTTTAGATGAATGGTTCACTCTGGACGAGGTTCCCAAA
GGAAAGCTGCATTTGAAGTTAGAGTGGCTCACACTGATGCCTGATGCTGCAAACCTTGACAAGGTGCTGG
CAGACATCAGAGCTGACAAGGACCAAGCCAGTGATGGCCTTTCATCTGCACTGCTGATCTTGTATTTGGA
TTCTGCAAGGAACCTTCCGTCAGGGAAGAAAATAAACAGCAACCCAAATCCTCTTGTCCAGATGTCAGTC
GGTCACAAGGCTCAAGAGAGTAAGATTCGATACAAAACTAGTGAGCCTGTATGGGAGGAAAACTTCACTT
TCTTCATTCATAACCCCAGGCGCCAGGACCTTGAGGTTGAGGTTAAAGATGAGCAGCATCAGTGTTCTCT
GGGGAGCCTGAGGATCCCACTCAGTCAACTGCTTACAAGTGACAACATGACTATAAACCAGCGGTTCCAG
CTTAGCAACTCGGGTCCAAACAGCACCTTAAAAATGAAGATTGCCCTCCGGGTCCTCCATCTTGAAAAGC
AAGAAAGGCCTCCAGACTACCAGCATTCAGCTCAAGTGAAACGGCCCTCTGTCTCCAAAGAAGGGAGGAA
AATGCCTATCAAATCTCAGATGTCTGCGTCGCCAGGCACCGGTGGTGCCAACACTGCTCCGTCAACACCA
GTCATGGGAGTCGATGATAAGCCTGCCATGGAGGAGAAGCCCCAGCCCCCTGAGGCCAGCCCTCTCGGGC
ATCGTGACCTAGGCAGGAGCTCCTCCAGCCTCTTGGCCTCTCCAAGCCACATCGCAGCCAAGGAACCCAC
CCCAAGCATTGCCTCAGACATATCACTGCCCATTGCCACTCAGGAGCTGAGACAAAGGCTACGTCAACTT
GAAAATGGGACAACCCTGGGACAATCTCCTCTGGGGCAGATCCAGCTGACTATCCGGCACAGCTCCCAAA
GGAATAAGCTCATCGTGGTTGTGCACTCCTGCAGAAACCTCATTGCCTTCTCGGAAGATGGCTCTGACCC
ATATGTCCGCATGTATTTATTACCAGACAAGAGACGCTCAGGAAGAAGGAAAACACATGTATCAAAGAAG
ACATTGAACCCTGTGTTTGATCAGAGCTTCGACTTCAGTGTTTCGCTGCCTGAGGTGCAAAGGAGAACAT
TGGATGTGGCTGTGAAGAACAGTGGTGGCTTCCTGTCCAAAGATAAAGGGCTTCTTGGCAAAGTGCTGGT
TGTTCTGGCATCTGAAGAACTCGCCAAGGGCTGGACCCAGTGGTATGACCTCACAGAAGATGGGACAAGG
CCACAGGTGATAACGTAG

Translation (845 aa):
MSSAGGEGPEAGPGRAGGRSEPEAPGSALSVDLPGLLGQLARSFALLLPVYALGYLGLSFSWVLLALGLL
AWCRRSRGLKASRLCRALALLEDEEQAVRLGVRACDLPAWVHFPDTERAEWLNKTVKHMWPFICQFIEKL
FRETIEPAVRGANAHLSTFSFTKVDVGQQPLRVNGVKVYTENVDKRQIILDLQISFVGNCEIDLEIKRYF
CRAGVKSIQIHGTMRVILEPLIGDMPLVGALSIFFLRKPLLEINWTGLTNLLDIPGLNGLSDTIILDIIS
NYLVLPNRITVPLVSEVQIAQLRFPIPKGVLRIHFIEAQDLQGKDTYLKGLVKGKSDPYGIIRVGNQIFQ
SKVIKENLSPKWNEVYEALVYEHPGQELEIELFDEDPDKDDFLGSLMIDLIEVEKERLLDEWFTLDEVPK
GKLHLKLEWLTLMPDAANLDKVLADIRADKDQASDGLSSALLILYLDSARNLPSGKKINSNPNPLVQMSV
GHKAQESKIRYKTSEPVWEENFTFFIHNPRRQDLEVEVKDEQHQCSLGSLRIPLSQLLTSDNMTINQRFQ
LSNSGPNSTLKMKIALRVLHLEKQERPPDYQHSAQVKRPSVSKEGRKMPIKSQMSASPGTGGANTAPSTP
VMGVDDKPAMEEKPQPPEASPLGHRDLGRSSSSLLASPSHIAAKEPTPSIASDISLPIATQELRQRLRQL
ENGTTLGQSPLGQIQLTIRHSSQRNKLIVVVHSCRNLIAFSEDGSDPYVRMYLLPDKRRSGRRKTHVSKK
TLNPVFDQSFDFSVSLPEVQRRTLDVAVKNSGGFLSKDKGLLGKVLVVLASEELAKGWTQWYDLTEDGTR
PQVIT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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