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Report for CCDS73315.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73315.1 Public Homo sapiens 11 EHD1 24 110 108 CCDS HistoryNCBI Gene:10938Re-query CCDS DB by CCDS ID:73315.1Re-query CCDS DB by GeneID:10938See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 73315.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000621096.4 ENSP00000479153.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000621096.4Link to Ensembl Protein Viewer:ENSP00000479153.1Re-query CCDS DB by Nucleotide ID:ENST00000621096Re-query CCDS DB by Protein ID:ENSP00000479153
Original member Current member NCBI NM_001282445.2 NP_001269374.1 Accepted alive Link to Nucleotide Sequence:NM_001282445.2Link to Protein Sequence:NP_001269374.1Re-query CCDS DB by Nucleotide ID:NM_001282445Re-query CCDS DB by Protein ID:NP_001269374Link to BLAST:NP_001269374.1

Chromosomal Locations for CCDS 73315.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 64854333 64854857 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64855322 64855486 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64859924 64860336 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64874421 64874518 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64878061 64878487 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64879612 64879630 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1647 nt):
ATGGAACAGCCAGGAACTGCAGCCAGCCCCGTGTCCGGCAGTATGTTCAGCTGGGTCAGCAAGGATGCCC
GCCGCAAGAAGGAGCCGGAGCTCTTCCAGACGGTGGCTGAGGGGCTGCGGCAGCTGTACGCGCAGAAGCT
GCTACCCCTGGAGGAGCACTACCGCTTCCACGAGTTCCACTCGCCCGCGCTGGAGGACGCTGACTTCGAC
AACAAGCCTATGGTGCTCCTCGTGGGGCAGTACAGCACGGGCAAGACCACCTTCATCCGACACCTGATCG
AGCAGGACTTCCCGGGGATGCGCATCGGGCCCGAGCCCACCACCGACTCCTTCATCGCCGTCATGCACGG
CCCCACTGAGGGCGTGGTGCCGGGCAACGCGCTCGTGGTGGACCCGCGGCGCCCCTTCCGCAAGCTCAAC
GCGTTTGGCAACGCTTTCCTCAACAGGTTCATGTGTGCCCAGCTGCCCAACCCCGTCCTGGACAGCATCA
GCATCATCGACACCCCCGGGATCCTGTCTGGAGAGAAGCAGCGGATCAGCAGAGGCTATGACTTTGCAGC
CGTCCTGGAGTGGTTCGCGGAGCGTGTGGACCGCATCATCCTGCTCTTCGACGCCCACAAGCTGGACATC
TCCGATGAGTTCTCGGAAGTGATCAAGGCTCTGAAGAACCATGAGGACAAGATCCGCGTGGTGCTGAACA
AGGCAGACCAGATCGAGACGCAGCAGCTGATGCGGGTGTACGGGGCCCTCATGTGGTCCCTGGGCAAGAT
CATCAACACCCCCGAGGTGGTCAGGGTCTACATCGGCTCCTTCTGGTCCCACCCGCTCCTCATCCCCGAC
AACCGCAAGCTCTTTGAGGCCGAGGAGCAGGACCTCTTCAAGGACATCCAGTCACTGCCCCGAAACGCCG
CCCTCAGGAAGCTCAATGACCTGATCAAGCGGGCACGGCTGGCCAAGGTTCACGCCTACATCATCAGCTC
CCTCAAGAAAGAGATGCCCAATGTCTTTGGTAAAGAGAGCAAAAAGAAAGAGCTGGTGAACAACCTCGGA
GAGATCTACCAGAAGATTGAGCGCGAGCACCAGATCTCCCCTGGGGACTTCCCGAGCCTCCGCAAGATGC
AGGAACTCCTGCAGACCCAGGACTTCAGCAAGTTCCAGGCGCTGAAGCCCAAGCTGCTGGACACGGTGGA
TGACATGCTGGCCAACGACATCGCGCGGCTGATGGTGATGGTGCGGCAGGAGGAGTCCCTGATGCCTTCC
CAGGTGGTCAAGGGCGGCGCCTTTGACGGCACCATGAACGGGCCGTTCGGGCACGGCTACGGCGAGGGGG
CCGGCGAGGGCATCGACGACGTGGAGTGGGTGGTGGGCAAGGACAAGCCCACCTACGACGAGATCTTCTA
CACGCTGTCCCCTGTCAACGGCAAGATCACGGGCGCCAACGCCAAGAAGGAGATGGTGAAGTCCAAGCTC
CCCAACACCGTGCTAGGGAAGATCTGGAAGCTGGCCGACGTGGACAAGGACGGGCTGCTGGACGACGAGG
AGTTCGCGCTGGCCAACCACCTCATCAAGGTCAAGCTGGAGGGCCACGAGCTGCCCGCCGACCTGCCCCC
GCACCTGGTGCCGCCCTCCAAGCGCAGACATGAGTGA

Translation (548 aa):
MEQPGTAASPVSGSMFSWVSKDARRKKEPELFQTVAEGLRQLYAQKLLPLEEHYRFHEFHSPALEDADFD
NKPMVLLVGQYSTGKTTFIRHLIEQDFPGMRIGPEPTTDSFIAVMHGPTEGVVPGNALVVDPRRPFRKLN
AFGNAFLNRFMCAQLPNPVLDSISIIDTPGILSGEKQRISRGYDFAAVLEWFAERVDRIILLFDAHKLDI
SDEFSEVIKALKNHEDKIRVVLNKADQIETQQLMRVYGALMWSLGKIINTPEVVRVYIGSFWSHPLLIPD
NRKLFEAEEQDLFKDIQSLPRNAALRKLNDLIKRARLAKVHAYIISSLKKEMPNVFGKESKKKELVNNLG
EIYQKIEREHQISPGDFPSLRKMQELLQTQDFSKFQALKPKLLDTVDDMLANDIARLMVMVRQEESLMPS
QVVKGGAFDGTMNGPFGHGYGEGAGEGIDDVEWVVGKDKPTYDEIFYTLSPVNGKITGANAKKEMVKSKL
PNTVLGKIWKLADVDKDGLLDDEEFALANHLIKVKLEGHELPADLPPHLVPPSKRRHE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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