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Report for CCDS31167.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31167.1 Public Homo sapiens 10 APBB1IP 24 110 108 CCDS HistoryNCBI Gene:54518Re-query CCDS DB by CCDS ID:31167.1See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31167.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000376236.9 ENSP00000365411.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000376236.9Link to Ensembl Protein Viewer:ENSP00000365411.4Re-query CCDS DB by Nucleotide ID:ENST00000376236Re-query CCDS DB by Protein ID:ENSP00000365411
Original member Current member NCBI NM_019043.4 NP_061916.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_019043.4Link to Protein Sequence:NP_061916.3Re-query CCDS DB by Nucleotide ID:NM_019043Re-query CCDS DB by Protein ID:NP_061916Link to BLAST:NP_061916.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_061916.3 666 Q7Z5R6-1 666 100% 0 0

Chromosomal Locations for CCDS 31167.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 26492327 26492398 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 26496304 26496391 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 26500819 26501111 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 26503197 26503274 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 26511747 26511906 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 26513539 26513660 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 26533439 26533525 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 26536074 26536217 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 26541582 26541692 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 26560105 26560203 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 26560730 26560844 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 26562326 26562429 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 26566961 26567488 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2001 nt):
ATGGGTGAGTCAAGTGAAGACATAGACCAAATGTTCAGCACTTTGCTGGGAGAGATGGATCTTCTGACTC
AGAGTTTAGGAGTTGACACTCTCCCTCCTCCTGACCCTAATCCACCCAGAGCTGAATTTAACTACAGTGT
GGGGTTTAAAGATTTAAATGAGTCCTTAAATGCACTGGAAGACCAAGATTTAGATGCTCTCATGGCAGAT
CTGGTAGCAGACATAAGTGAGGCTGAGCAGAGGACAATCCAGGCACAGAAAGAGTCCTTGCAGAATCAAC
ATCATTCAGCATCTCTACAAGCATCAATTTTCAGTGGTGCAGCCTCTCTTGGTTATGGAACAAATGTTGC
TGCCACTGGTATCAGCCAATATGAGGATGACTTACCACCTCCACCAGCCGATCCTGTGTTAGACCTTCCA
CTGCCACCACCACCTCCTGAACCTCTCTCTCAGGAAGAGGAAGAAGCCCAAGCCAAGGCTGATAAAATTA
AGCTGGCGCTGGAAAAACTGAAGGAGGCCAAGGTTAAGAAGCTCGTCGTCAAGGTGCACATGAATGATAA
CAGCACAAAGTCACTGATGGTGGATGAGCGGCAGCTGGCCCGAGATGTTCTGGACAACCTTTTCGAGAAA
ACTCATTGTGACTGCAATGTAGACTGGTGTCTTTATGAAATCTACCCGGAACTACAAATTGAGAGGTTTT
TTGAAGACCATGAAAATGTTGTTGAAGTCTTATCAGACTGGACAAGAGACACAGAAAATAAAATACTATT
TTTGGAGAAAGAGGAGAAATATGCTGTATTTAAAAACCCCCAGAATTTCTACTTGGATAACAGAGGAAAA
AAAGAAAGCAAGGAAACTAATGAGAAAATGAATGCTAAGAACAAGGAATCCTTACTTGAGGAAAGTTTCT
GTGGAACATCTATCATTGTACCAGAACTGGAAGGAGCTCTTTATTTGAAAGAAGATGGAAAGAAATCCTG
GAAAAGGCGCTATTTTCTTTTACGGGCTTCTGGAATTTATTATGTACCCAAAGGAAAGACTAAGACATCT
CGAGATCTGGCGTGTTTTATACAGTTTGAAAATGTCAACATTTACTATGGGACTCAGCATAAAATGAAAT
ATAAAGCGCCCACTGACTATTGCTTTGTTTTAAAGCACCCCCAAATTCAGAAGGAGTCCCAGTATATCAA
GTATCTCTGCTGTGATGACACAAGAACCCTTAACCAGTGGGTCATGGGAATACGGATAGCCAAGTATGGG
AAGACTCTCTATGATAACTACCAGCGGGCTGTGGCAAAGGCTGGACTTGCCTCTCGGTGGACAAACTTGG
GGACAGTCAATGCAGCTGCACCAGCTCAGCCATCTACAGGACCTAAAACAGGCACCACCCAGCCCAATGG
ACAGATTCCCCAGGCTACACATTCTGTCAGTGCTGTTCTCCAAGAGGCCCAGAGACATGCTGAAACATCG
AAGGATAAGAAGCCAGCCCTCGGGAACCACCACGACCCGGCAGTGCCCCGGGCCCCGCACGCCCCCAAGT
CCAGCCTGCCCCCGCCCCCTCCGGTGCGGAGGTCCTCCGACACCAGCGGCAGTCCCGCCACGCCCCTCAA
GGCCAAGGGCACAGGCGGCGGGGGCTTGCCCGCCCCACCCGACGACTTCCTGCCGCCGCCGCCACCGCCG
CCGCCCCTCGATGACCCTGAGCTCCCGCCGCCGCCCCCGGACTTCATGGAGCCGCCCCCAGACTTCGTGC
CCCCGCCCCCGCCGTCGTACGCAGGGATCGCGGGCTCAGAGCTGCCCCCGCCGCCGCCGCCGCCGCCCGC
GCCCGCGCCCGCCCCCGTCCCCGACTCCGCCAGGCCGCCCCCCGCGGTGGCCAAGAGGCCTCCTGTGCCC
CCCAAGAGGCAAGAGAACCCAGGGCACCCCGGCGGAGCAGGAGGCGGGGAGCAAGATTTCATGTCAGACC
TCATGAAAGCTTTGCAAAAGAAGAGAGGCAACGTGTCCTAG

Translation (666 aa):
MGESSEDIDQMFSTLLGEMDLLTQSLGVDTLPPPDPNPPRAEFNYSVGFKDLNESLNALEDQDLDALMAD
LVADISEAEQRTIQAQKESLQNQHHSASLQASIFSGAASLGYGTNVAATGISQYEDDLPPPPADPVLDLP
LPPPPPEPLSQEEEEAQAKADKIKLALEKLKEAKVKKLVVKVHMNDNSTKSLMVDERQLARDVLDNLFEK
THCDCNVDWCLYEIYPELQIERFFEDHENVVEVLSDWTRDTENKILFLEKEEKYAVFKNPQNFYLDNRGK
KESKETNEKMNAKNKESLLEESFCGTSIIVPELEGALYLKEDGKKSWKRRYFLLRASGIYYVPKGKTKTS
RDLACFIQFENVNIYYGTQHKMKYKAPTDYCFVLKHPQIQKESQYIKYLCCDDTRTLNQWVMGIRIAKYG
KTLYDNYQRAVAKAGLASRWTNLGTVNAAAPAQPSTGPKTGTTQPNGQIPQATHSVSAVLQEAQRHAETS
KDKKPALGNHHDPAVPRAPHAPKSSLPPPPPVRRSSDTSGSPATPLKAKGTGGGGLPAPPDDFLPPPPPP
PPLDDPELPPPPPDFMEPPPDFVPPPPPSYAGIAGSELPPPPPPPPAPAPAPVPDSARPPPAVAKRPPVP
PKRQENPGHPGGAGGGEQDFMSDLMKALQKKRGNVS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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