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Report for CCDS33265.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33265.1 Public Homo sapiens 2 POU3F3 24 110 108 CCDS HistoryNCBI Gene:5455Re-query CCDS DB by CCDS ID:33265.1Re-query CCDS DB by GeneID:5455See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)


Attributes
Inferred exon combination

Sequence IDs included in CCDS 33265.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000361360.4 ENSP00000355001.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000361360.4Link to Ensembl Protein Viewer:ENSP00000355001.2Re-query CCDS DB by Nucleotide ID:ENST00000361360Re-query CCDS DB by Protein ID:ENSP00000355001
Original member Current member EBI ENST00000674056.1 ENSP00000501036.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000674056.1Link to Ensembl Protein Viewer:ENSP00000501036.1Re-query CCDS DB by Nucleotide ID:ENST00000674056Re-query CCDS DB by Protein ID:ENSP00000501036
Original member Current member NCBI NM_006236.3 NP_006227.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_006236.3Link to Protein Sequence:NP_006227.1Re-query CCDS DB by Nucleotide ID:NM_006236Re-query CCDS DB by Protein ID:NP_006227Link to BLAST:NP_006227.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_006227.1 500 P20264 500 100% 0 0

Chromosomal Locations for CCDS 33265.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 104855511 104857013 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1503 nt):
ATGGCCACGGCGGCTTCTAACCCCTACCTGCCGGGGAACAGCCTGCTCGCGGCCGGCTCTATTGTGCACT
CG
GACGCGGCAGGGGCTGGCGGCGGCGGGGGTGGCGGCGGCGGCGGCGGCGGGGGCGGCGCAGGGGGCGG
G
GGCGGCGGCATGCAGCCGGGCAGCGCCGCCGTGACCTCGGGCGCCTACCGGGGGGACCCGTCCTCTGTC
AAG
ATGGTCCAGAGCGACTTCATGCAGGGGGCCATGGCCGCCAGCAACGGCGGCCATATGCTGAGCCACG
CG
CACCAGTGGGTCACAGCCCTGCCCCACGCCGCCGCCGCCGCCGCCGCTGCCGCCGCCGCCGCCGTGGA
G
GCGAGCTCGCCGTGGTCGGGCAGCGCCGTGGGCATGGCTGGCAGCCCCCAGCAGCCACCGCAGCCGCCG
CCG
CCACCGCCGCAGGGCCCCGACGTGAAGGGCGGCGCCGGGCGCGACGACCTGCACGCGGGCACAGCGC
TG
CACCACCGCGGGCCGCCGCACCTCGGACCCCCGCCGCCGCCCCCACACCAGGGCCACCCTGGGGGCTG
G
GGGGCGGCCGCCGCTGCCGCAGCCGCAGCCGCCGCCGCCGCCGCCGCCGCGCACCTCCCGTCCATGGCC
GGG
GGCCAGCAGCCGCCGCCGCAGAGTCTGCTCTACTCGCAGCCCGGAGGCTTCACGGTGAACGGCATGC
TG
AGCGCGCCACCGGGGCCCGGCGGCGGCGGCGGCGGCGCGGGCGGTGGAGCCCAGAGCTTGGTGCACCC
G
GGGCTGGTGCGCGGGGACACGCCAGAGCTGGCCGAGCACCACCACCACCACCACCACCACGCGCATCCT
CAC
CCGCCGCACCCGCACCACGCGCAGGGACCCCCGCACCACGGCGGCGGCGGCGGCGGCGCGGGGCCTG
GA
CTCAACAGCCACGACCCGCACTCGGACGAGGACACGCCGACGTCGGACGACCTGGAGCAGTTCGCCAA
G
CAGTTCAAGCAGCGGCGCATCAAGCTGGGCTTCACGCAGGCCGACGTGGGGTTGGCGCTGGGCACACTC
TAC
GGCAACGTGTTCTCGCAGACCACCATCTGCCGCTTCGAGGCCCTGCAGCTGAGCTTCAAGAACATGT
GC
AAGCTCAAGCCGCTGCTGAACAAGTGGCTGGAGGAGGCGGACTCAAGCACCGGCAGCCCCACAAGCAT
C
GACAAGATCGCGGCGCAGGGCCGCAAGCGCAAGAAGCGGACCTCTATCGAGGTGAGCGTCAAGGGCGCG
CTG
GAGAGCCACTTCCTCAAGTGCCCCAAGCCCTCCGCGCAGGAGATCACCAACCTGGCCGACAGCCTGC
AG
CTCGAGAAGGAGGTGGTGCGGGTCTGGTTCTGCAATCGGCGCCAAAAGGAGAAGCGCATGACGCCGCC
C
GGGATCCAACAGCAGACGCCCGACGACGTCTACTCGCAGGTGGGCACCGTGAGCGCCGACACGCCGCCG
CCT
CACCACGGGCTGCAGACGAGCGTTCAGTGA


Translation (500 aa):
MATAASNPYLPGNSLLAAGSIVHSDAAGAGGGGGGGGGGGGGGAGGGGGGMQPGSAAVTSGAYRGDPSSV
K
MVQSDFMQGAMAASNGGHMLSHAHQWVTALPHAAAAAAAAAAAAVEASSPWSGSAVGMAGSPQQPPQPP
P
PPPQGPDVKGGAGRDDLHAGTALHHRGPPHLGPPPPPPHQGHPGGWGAAAAAAAAAAAAAAAAHLPSMA
G
GQQPPPQSLLYSQPGGFTVNGMLSAPPGPGGGGGGAGGGAQSLVHPGLVRGDTPELAEHHHHHHHHAHP
H
PPHPHHAQGPPHHGGGGGGAGPGLNSHDPHSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTL
Y
GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSSTGSPTSIDKIAAQGRKRKKRTSIEVSVKGA
L
ESHFLKCPKPSAQEITNLADSLQLEKEVVRVWFCNRRQKEKRMTPPGIQQQTPDDVYSQVGTVSADTPP
P
HHGLQTSVQ




Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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