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Report for CCDS10158.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10158.1 Public Homo sapiens 15 MNS1 24 110 108 CCDS HistoryNCBI Gene:55329Re-query CCDS DB by CCDS ID:10158.1See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10158.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000260453.4 ENSP00000260453.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000260453.4Link to Ensembl Protein Viewer:ENSP00000260453.3Re-query CCDS DB by Nucleotide ID:ENST00000260453Re-query CCDS DB by Protein ID:ENSP00000260453
Original member Current member NCBI NM_018365.4 NP_060835.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_018365.4Link to Protein Sequence:NP_060835.1Re-query CCDS DB by Nucleotide ID:NM_018365Re-query CCDS DB by Protein ID:NP_060835Link to BLAST:NP_060835.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060835.1 495 Q8NEH6 495 100% 0 0

Chromosomal Locations for CCDS 10158.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 56429101 56429193 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 56431373 56431498 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 56434138 56434395 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 56443430 56443537 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 56443638 56443854 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 56444444 56444673 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 56446841 56446943 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 56456394 56456521 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 56464026 56464247 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 56464970 56464972 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1488 nt):
ATGGGTTCCAAAAGGAGAAATTTGAGCTGTAGTGAAAGGCATCAGAAATTAGTAGATGAAAACTACTGCA
AAAAATTACATGTCCAAGCTCTAAAAAACGTCAACAGTCAAATCAGGAATCAAATGGTGCAGAATGAAAA
TGATAACCGTGTTCAGCGCAAGCAATTTCTCAGATTATTACAAAATGAACAATTTGAGTTGGATATGGAA
GAGGCCATTCAAAAGGCAGAAGAAAACAAGAGATTGAAAGAACTCCAGCTCAAACAAGAAGAAAAACTGG
CTATGGAATTGGCAAAACTGAAACATGAAAGTCTAAAGGACGAAAAGATGAGGCAACAAGTAAGAGAAAA
CAGCATTGAGCTTAGAGAATTGGAGAAGAAATTAAAAGCAGCTTACATGAATAAAGAAAGGGCAGCTCAG
ATTGCTGAAAAGGATGCCATTAAATATGAACAAATGAAACGTGATGCTGAAATAGCCAAAACCATGATGG
AAGAACACAAGAGAATAATAAAGGAAGAGAATGCTGCAGAAGACAAACGAAACAAAGCGAAAGCACAGTA
CTATCTTGACTTAGAGAAACAACTTGAAGAACAAGAAAAAAAAAAGCAGGAAGCTTATGAGCAGCTGCTA
AAAGAGAAACTCATGATTGATGAAATTGTTAGGAAGATCTATGAAGAAGATCAGTTGGAAAAACAACAAA
AGTTAGAAAAAATGAATGCAATGCGAAGGTATATAGAAGAGTTTCAGAAAGAGCAGGCTCTCTGGAGAAA
AAAGAAACGTGAGGAGATGGAAGAAGAAAACAGAAAAATCATAGAGTTTGCTAACATGCAGCAGCAAAGA
GAAGAAGATCGGATGGCAAAAGTTCAAGAAAATGAGGAGAAAAGGCTACAGCTTCAGAATGCGTTGACAC
AGAAATTAGAAGAAATGCTGCGGCAACGTGAAGATTTGGAACAAGTGCGACAAGAATTATACCAGGAAGA
ACAAGCTGAAATATATAAGAGCAAGCTAAAAGAAGAAGCAGAAAAGAAATTGAGAAAGCAAAAAGAGATG
AAGCAAGATTTTGAAGAACAAATGGCCTTGAAGGAATTAGTGCTACAGGCTGCAAAAGAGGAAGAGGAGA
ACTTTAGAAAAACTATGCTAGCTAAATTTGCTGAGGATGATCGAATAGAATTAATGAATGCTCAGAAACA
AAGAATGAAGCAGCTGGAACACAGGAGGGCTGTGGAAAAACTTATTGAAGAGCGTCGCCAACAATTCCTT
GCAGACAAACAACGTGAACTAGAAGAGTGGCAGTTGCAGCAAAGGCGGCAAGGATTTATTAATGCAATTA
TTGAAGAAGAAAGGCTAAAACTTCTTAAAGAGCATGCTACAAACTTACTAGGCTATCTCCCTAAAGGAGT
ATTTAAAAAAGAGGATGATATTGATCTGCTTGGTGAAGAGTTCAGGAAAGTATATCAACAAAGGAGTGAA
ATTTGTGAAGAGAAATGA

Translation (495 aa):
MGSKRRNLSCSERHQKLVDENYCKKLHVQALKNVNSQIRNQMVQNENDNRVQRKQFLRLLQNEQFELDME
EAIQKAEENKRLKELQLKQEEKLAMELAKLKHESLKDEKMRQQVRENSIELRELEKKLKAAYMNKERAAQ
IAEKDAIKYEQMKRDAEIAKTMMEEHKRIIKEENAAEDKRNKAKAQYYLDLEKQLEEQEKKKQEAYEQLL
KEKLMIDEIVRKIYEEDQLEKQQKLEKMNAMRRYIEEFQKEQALWRKKKREEMEEENRKIIEFANMQQQR
EEDRMAKVQENEEKRLQLQNALTQKLEEMLRQREDLEQVRQELYQEEQAEIYKSKLKEEAEKKLRKQKEM
KQDFEEQMALKELVLQAAKEEEENFRKTMLAKFAEDDRIELMNAQKQRMKQLEHRRAVEKLIEERRQQFL
ADKQRELEEWQLQQRRQGFINAIIEEERLKLLKEHATNLLGYLPKGVFKKEDDIDLLGEEFRKVYQQRSE
ICEEK


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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