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Report for CCDS6731.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6731.1 Public Homo sapiens 9 HEMGN 24 110 108 CCDS HistoryNCBI Gene:55363Re-query CCDS DB by CCDS ID:6731.1See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6731.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000259456.7 ENSP00000259456.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000259456.7Link to Ensembl Protein Viewer:ENSP00000259456.2Re-query CCDS DB by Nucleotide ID:ENST00000259456Re-query CCDS DB by Protein ID:ENSP00000259456
Original member Current member EBI ENST00000616898.2 ENSP00000480020.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000616898.2Link to Ensembl Protein Viewer:ENSP00000480020.1Re-query CCDS DB by Nucleotide ID:ENST00000616898Re-query CCDS DB by Protein ID:ENSP00000480020
Original member Current member NCBI NM_018437.5 NP_060907.2 Accepted alive Link to Nucleotide Sequence:NM_018437.5Link to Protein Sequence:NP_060907.2Re-query CCDS DB by Nucleotide ID:NM_018437Re-query CCDS DB by Protein ID:NP_060907Link to BLAST:NP_060907.2
Original member Current member NCBI NM_197978.3 NP_932095.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_197978.3Link to Protein Sequence:NP_932095.1Re-query CCDS DB by Nucleotide ID:NM_197978Re-query CCDS DB by Protein ID:NP_932095Link to BLAST:NP_932095.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060907.2 484 Q9BXL5 484 100% 0 0
NP_932095.1 484 Q9BXL5 484 100% 0 0

Chromosomal Locations for CCDS 6731.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 97927384 97927478 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 97930035 97931221 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 97936171 97936264 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 97938058 97938136 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1455 nt):
ATGGATTTGGGAAAGGACCAATCTCATTTGAAGCACCATCAGACACCTGACCCTCATCAAGAAGAGAACC
ATTCTCCAGAAGTCATTGGAACCTGGAGTTTGAGAAACAGAGAACTACTTAGAAAAAGAAAAGCTGAAGT
GCATGAAAAGGAAACATCACAATGGCTATTTGGAGAACAGAAAAAACGCAAGCAGCAGAGAACAGGAAAA
GGAAATCGAAGAGGCAGAAAGAGACAACAAAACACAGAATTGAAGGTGGAGCCTCAGCCACAGATAGAAA
AGGAAATAGTGGAGAAAGCACTGGCACCTATAGAGAAAAAAACTGAGCCACCTGGGAGCATAACCAAAGT
ATTTCCTTCAGTAGCCTCCCCGCAAAAAGTTGTGCCTGAGGAACACTTTTCTGAAATATGTCAAGAAAGT
AACATATATCAGGAGAATTTTTCTGAGTACCAAGAAATAGCAGTACAAAACCATTCTTCTGAAACATGCC
AACATGTGTCTGAACCTGAAGACCTCTCTCCTAAAATGTACCAAGAAATATCTGTACTTCAAGACAATTC
TTCCAAAATATGCCAAGACATGAAGGAACCTGAAGACAACTCTCCTAACACATGCCAAGTAATATCTGTA
ATTCAAGACCATCCTTTCAAAATGTACCAAGATATGGCTAAACGAGAAGATCTGGCTCCTAAAATGTGCC
AAGAAGCTGCTGTACCCAAAATCCTTCCTTGTCCAACATCTGAAGACACAGCTGATCTGGCAGGATGCTC
TCTTCAAGCATATCCAAAACCAGATGTGCCTAAAGGCTATATTCTTGACACAGACCAAAATCCAGCAGAA
CCAGAGGAATACAATGAAACAGATCAAGGAATAGCTGAGACAGAAGGCCTTTTTCCTAAAATACAAGAAA
TAGCTGAGCCTAAAGACCTTTCTACAAAAACACACCAAGAATCAGCTGAACCTAAATACCTTCCTCATAA
AACATGTAACGAAATTATTGTGCCTAAAGCCCCCTCTCATAAAACAATCCAAGAAACACCTCATTCTGAA
GACTATTCAATTGAAATAAACCAAGAAACTCCTGGGTCTGAAAAATATTCACCTGAAACGTATCAAGAAA
TACCTGGGCTTGAAGAATATTCACCTGAAATATACCAAGAAACATCCCAGCTTGAAGAATATTCACCTGA
AATATACCAAGAAACACCGGGGCCTGAAGACCTCTCTACTGAGACATATAAAAATAAGGATGTGCCTAAA
GAATGCTTTCCAGAACCACACCAAGAAACAGGTGGGCCCCAAGGCCAGGATCCTAAAGCACACCAGGAAG
ATGCTAAAGATGCTTATACTTTTCCTCAAGAAATGAAAGAAAAACCCAAAGAAGAGCCAGGAATACCAGC
AATTCTGAATGAGAGTCATCCAGAAAATGATGTCTATAGTTATGTTTTGTTTTAA

Translation (484 aa):
MDLGKDQSHLKHHQTPDPHQEENHSPEVIGTWSLRNRELLRKRKAEVHEKETSQWLFGEQKKRKQQRTGK
GNRRGRKRQQNTELKVEPQPQIEKEIVEKALAPIEKKTEPPGSITKVFPSVASPQKVVPEEHFSEICQES
NIYQENFSEYQEIAVQNHSSETCQHVSEPEDLSPKMYQEISVLQDNSSKICQDMKEPEDNSPNTCQVISV
IQDHPFKMYQDMAKREDLAPKMCQEAAVPKILPCPTSEDTADLAGCSLQAYPKPDVPKGYILDTDQNPAE
PEEYNETDQGIAETEGLFPKIQEIAEPKDLSTKTHQESAEPKYLPHKTCNEIIVPKAPSHKTIQETPHSE
DYSIEINQETPGSEKYSPETYQEIPGLEEYSPEIYQETSQLEEYSPEIYQETPGPEDLSTETYKNKDVPK
ECFPEPHQETGGPQGQDPKAHQEDAKDAYTFPQEMKEKPKEEPGIPAILNESHPENDVYSYVLF


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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