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Report for CCDS44954.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44954.1 Public Homo sapiens 12 VEZT 24 110 108 CCDS HistoryNCBI Gene:55591Re-query CCDS DB by CCDS ID:44954.1See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44954.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000436874.6 ENSP00000410083.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000436874.6Link to Ensembl Protein Viewer:ENSP00000410083.1Re-query CCDS DB by Nucleotide ID:ENST00000436874Re-query CCDS DB by Protein ID:ENSP00000410083
Original member Current member NCBI NM_017599.4 NP_060069.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_017599.4Link to Protein Sequence:NP_060069.3Re-query CCDS DB by Nucleotide ID:NM_017599Re-query CCDS DB by Protein ID:NP_060069Link to BLAST:NP_060069.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060069.3 779 Q9HBM0-1 779 100% 0 0

Chromosomal Locations for CCDS 44954.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 95217851 95217886 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 95251940 95252071 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 95257150 95257239 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 95262906 95263081 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 95266357 95266632 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 95270051 95270188 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 95274742 95274889 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 95282313 95282644 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 95287664 95287857 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 95294272 95294372 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 95296051 95296258 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 95300165 95300673 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2340 nt):
ATGACACCGGAGTTTGACGAAGAGGTGGTTTTTGAGAATTCTCCACTTTACCAATACTTACAGGATCTGG
GACACACAGACTTTGAAATATGTTCTTCTTTGTCACCAAAAACAGAAAAATGCACAACAGAGGGACAACA
AAAGCCTCCTACAAGAGTCCTACCAAAACAAGGTATCCTGTTAAAAGTGGCTGAAACCATCAAAAGTTGG
ATTTTTTTTTCTCAGTGCAATAAGAAAGATGACTTACTTCACAAGTTGGATATTGGATTCCGACTCGACT
CATTACATACCATCCTGCAACAGGAAGTCCTGTTACAAGAGGATGTGGAGCTGATTGAGCTACTTGATCC
CAGTATCCTGTCTGCAGGGCAATCTCAACAACAGGAAAATGGACACCTTCCAACACTTTGCTCCCTGGCA
ACCCCTAATATTTGGGATCTCTCAATGCTATTTGCCTTCATTAGCTTGCTCGTTATGCTTCCCACTTGGT
GGATTGTGTCTTCCTGGCTGGTATGGGGAGTGATTCTATTTGTGTATCTGGTCATAAGAGCTTTGAGATT
ATGGAGGACAGCCAAACTACAAGTGACCCTAAAAAAATACAGCGTTCATTTGGAAGATATGGCCACAAAC
AGCCGAGCTTTTACTAACCTCGTGAGAAAAGCTTTACGTCTCATTCAAGAAACCGAAGTGATTTCCAGAG
GATTTACACTGGTCAGTGCTGCTTGCCCATTTAATAAAGCTGGACAGCATCCAAGTCAGCATCTCATCGG
TCTTCGGAAAGCTGTCTACCGAACTCTAAGAGCCAACTTCCAAGCAGCAAGGCTAGCTACCCTATATATG
CTGAAAAACTACCCCCTGAACTCTGAGAGTGACAATGTAACCAACTACATCTGTGTGGTGCCTTTTAAAG
AGCTGGGCCTTGGACTTAGTGAAGAGCAGATTTCAGAAGAGGAAGCACATAACTTTACAGATGGCTTCAG
CCTGCCTGCATTGAAGGTTTTGTTCCAACTCTGGGTGGCACAGAGTTCAGAGTTCTTCAGACGGTTAGCC
CTATTACTTTCTACAGCCAATTCACCTCCTGGGCCCTTACTTACTCCAGCACTTCTGCCTCATCGTATCT
TATCTGATGTGACTCAAGGTCTACCTCATGCTCATTCTGCCTGTTTGGAAGAGCTTAAGCGCAGCTATGA
GTTCTATCGGTACTTTGAAACTCAGCACCAGTCAGTACCGCAGTGTTTATCCAAAACTCAACAGAAGTCA
AGAGAACTGAATAATGTTCACACAGCAGTGCGTAGCTTGCAGCTCCATCTGAAAGCATTACTGAATGAGG
TAATAATTCTTGAAGATGAACTTGAAAAGCTTGTTTGTACTAAAGAAACACAAGAACTAGTGTCAGAGGC
TTATCCCATCCTAGAACAGAAATTAAAGTTGATTCAGCCCCACGTTCAAGCAAGCAACAATTGCTGGGAA
GAGGCCATTTCTCAGGTCGACAAACTGCTACGAAGAAATACAGATAAAAAAGGCAAGCCTGAAATAGCAT
GTGAAAACCCACATTGTACAGTAGTACCTTTGAAGCAGCCTACTCTACACATTGCAGACAAAGATCCAAT
CCCAGAGGAGCAGGAATTAGAAGCTTATGTAGATGATATAGATATTGATAGTGATTTCAGAAAGGATGAT
TTTTATTACTTGTCTCAAGAAGACAAAGAGAGACAGAAGCGTGAGCATGAAGAATCCAAGAGGGTGCTCC
AAGAATTAAAATCTGTGCTGGGATTTAAAGCTTCAGAGGCAGAAAGGCAGAAGTGGAAGCAACTTCTATT
TAGTGATCATGCCGTGTTGAAATCCTTGTCTCCTGTAGACCCAGTGGAACCCATAAGTAATTCAGAACCA
TCAATGAATTCAGATATGGGAAAAGTCAGTAAAAATGATACTGAAGAGGAAAGTAATAAATCCGCCACAA
CAGACAATGAAATAAGTAGGACTGAGTATTTATGTGAAAACTCTCTAGAAGGTAAAAATAAAGATAATTC
TTCAAATGAAGTCTTCCCCCAAGGAGCAGAAGAAAGAATGTGTTACCAATGTGAGAGTGAAGATGAACCA
CAAGCAGATGGAAGTGGTCTGACCACTGCCCCTCCAACTCCCAGGGACTCATTACAGCCCTCCATTAAGC
AGAGGCTGGCACGGCTACAGCTGTCACCAGATTTTACCTTCACTGCTGGCCTTGCTGCAGAAGTGGCTGC
TAGATCTCTCTCCTTTACCACCATGCAGGAACAGACTTTTGGTGGTGAGGAGGAAGAACAAATAATAGAA
GAAAATAAAAATGAGATAGAAGAAAAGTAA

Translation (779 aa):
MTPEFDEEVVFENSPLYQYLQDLGHTDFEICSSLSPKTEKCTTEGQQKPPTRVLPKQGILLKVAETIKSW
IFFSQCNKKDDLLHKLDIGFRLDSLHTILQQEVLLQEDVELIELLDPSILSAGQSQQQENGHLPTLCSLA
TPNIWDLSMLFAFISLLVMLPTWWIVSSWLVWGVILFVYLVIRALRLWRTAKLQVTLKKYSVHLEDMATN
SRAFTNLVRKALRLIQETEVISRGFTLVSAACPFNKAGQHPSQHLIGLRKAVYRTLRANFQAARLATLYM
LKNYPLNSESDNVTNYICVVPFKELGLGLSEEQISEEEAHNFTDGFSLPALKVLFQLWVAQSSEFFRRLA
LLLSTANSPPGPLLTPALLPHRILSDVTQGLPHAHSACLEELKRSYEFYRYFETQHQSVPQCLSKTQQKS
RELNNVHTAVRSLQLHLKALLNEVIILEDELEKLVCTKETQELVSEAYPILEQKLKLIQPHVQASNNCWE
EAISQVDKLLRRNTDKKGKPEIACENPHCTVVPLKQPTLHIADKDPIPEEQELEAYVDDIDIDSDFRKDD
FYYLSQEDKERQKREHEESKRVLQELKSVLGFKASEAERQKWKQLLFSDHAVLKSLSPVDPVEPISNSEP
SMNSDMGKVSKNDTEEESNKSATTDNEISRTEYLCENSLEGKNKDNSSNEVFPQGAEERMCYQCESEDEP
QADGSGLTTAPPTPRDSLQPSIKQRLARLQLSPDFTFTAGLAAEVAARSLSFTTMQEQTFGGEEEEQIIE
ENKNEIEEK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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