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Report for CCDS10896.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10896.1 Public Homo sapiens 16 VAC14 24 110 108 CCDS HistoryNCBI Gene:55697Re-query CCDS DB by CCDS ID:10896.1See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10896.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000261776.10 ENSP00000261776.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000261776.10Link to Ensembl Protein Viewer:ENSP00000261776.5Re-query CCDS DB by Nucleotide ID:ENST00000261776Re-query CCDS DB by Protein ID:ENSP00000261776
Original member Current member NCBI NM_018052.5 NP_060522.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_018052.5Link to Protein Sequence:NP_060522.3Re-query CCDS DB by Nucleotide ID:NM_018052Re-query CCDS DB by Protein ID:NP_060522Link to BLAST:NP_060522.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060522.3 782 Q08AM6-1 782 100% 0 0

Chromosomal Locations for CCDS 10896.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 70687928 70688090 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 70692821 70692971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 70695544 70695623 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 70697139 70697257 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 70698637 70698811 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 70731495 70731627 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 70744423 70744579 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 70762540 70762605 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 70762881 70763025 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 70772109 70772172 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 70780790 70780939 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 70781869 70782003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 70783033 70783139 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 70783445 70783554 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 70784113 70784220 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 70784776 70784838 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 70785702 70785869 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 70786215 70786365 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 70800797 70800900 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2349 nt):
ATGAACCCCGAGAAGGATTTCGCGCCGCTCACGCCTAACATCGTGCGCGCCCTCAATGACAAGCTGTACG
AAAAGCGGAAGGTGGCAGCGCTGGAGATCGAGAAGCTGGTCCGGGAGTTCGTGGCCCAGAACAATACCGT
GCAAATCAAGCATGTGATCCAGACCCTGTCCCAGGAGTTTGCCCTGTCTCAGCACCCCCACAGCCGGAAA
GGGGGCCTCATCGGCCTGGCCGCCTGCTCCATCGCACTGGGCAAGGACTCAGGGCTCTACCTGAAGGAGC
TGATCGAGCCAGTGCTGACCTGCTTCAATGATGCAGACAGCAGGCTGCGCTACTATGCCTGCGAGGCCCT
CTACAACATCGTCAAGGTGGCCCGGGGCGCTGTGCTGCCCCACTTCAACGTGCTCTTTGACGGGCTGAGC
AAGCTGGCAGCCGACCCAGACCCCAATGTGAAAAGCGGATCTGAGCTCCTAGACCGCCTTTTAAAGGACA
TTGTGACTGAGAGCAACAAGTTTGACCTGGTGAGCTTCATCCCCTTGTTGCGAGAGAGGATTTACTCCAA
CAACCAGTATGCCCGGCAGTTCATCATCTCCTGGATCCTGGTTCTGGAGTCGGTGCCAGACATTAACCTG
CTGGATTACCTGCCGGAGATCCTGGATGGACTCTTCCAGATCCTGGGTGACAATGGCAAAGAGATTCGCA
AAATGTGTGAGGTTGTTCTTGGAGAATTCTTAAAAGAAATTAAGAAGAACCCCTCCAGTGTGAAGTTTGC
TGAGATGGCCAACATCCTGGTGATCCACTGCCAGACAACAGATGACCTCATCCAGCTGACAGCCATGTGC
TGGATGCGGGAGTTCATCCAGCTGGCGGGCCGCGTCATGCTGCCTTACTCCTCCGGGATCCTGACTGCTG
TCTTGCCCTGCTTGGCCTACGATGACCGCAAGAAAAGCATCAAAGAAGTGGCCAACGTGTGCAACCAGAG
CCTGATGAAGCTGGTCACCCCCGAGGACGACGAGCTGGATGAGCTGAGACCTGGGCAGAGGCAGGCAGAG
CCCACCCCTGACGATGCCCTGCCAAAGCAGGAGGGCACAGCCAGTGGAGGTCCAGATGGTTCCTGTGACT
CCAGCTTCAGTAGCGGCATCAGTGTCTTCACTGCAGCCAGCACTGAAAGAGCCCCAGTGACCCTTCACCT
CGACGGGATCGTGCAGGTCCTAAACTGCCACCTCAGTGACACGGCCATTGGGATGATGACCAGGATTGCA
GTTCTCAAGTGGCTCTACCACCTCTACATCAAAACTCCTCGGAAGATGTTCCGGCACACGGACAGCCTCT
TTCCCATCCTACTGCAGACGTTATCGGATGAATCGGATGAGGTGATCCTGAAGGACCTGGAGGTGCTGGC
AGAAATCGCTTCCTCCCCCGCAGGCCAGACGGATGACCCAGGCCCCCTCGATGGCCCTGACCTCCAGGCC
AGCCACTCAGAGCTCCAGGTGCCCACCCCTGGCAGAGCCGGCCTACTGAACACCTCTGGTACCAAAGGCT
TAGAATGTTCTCCTTCAACTCCCACCATGAATTCTTACTTTTATAAGTTCATGATCAACCTTCTCAAGAG
ATTCAGCAGCGAACGGAAGCTCCTGGAGGTCAGAGGCCCTTTCATCATCAGGCAGCTGTGCCTCCTGCTG
AATGCGGAGAACATCTTCCACTCAATGGCAGACATCCTGCTGCGGGAGGAGGACCTCAAGTTCGCCTCGA
CCATGGTCCACGCCCTCAACACCATCCTGCTGACCTCCACAGAGCTCTTCCAGCTAAGGAACCAGCTGAA
GGACCTGAAGACCCTGGAGAGCCAGAACCTGTTCTGCTGCCTGTACCGCTCCTGGTGCCACAACCCAGTC
ACCACGGTGTCCCTCTGCTTCCTCACCCAGAACTACCGGCACGCCTATGACCTCATCCAGAAGTTTGGGG
ACCTGGAGGTCACCGTGGACTTCCTCGCAGAGGTGGACAAGCTGGTGCAGCTGATTGAGTGCCCCATCTT
CACATATCTGCGCCTGCAGCTGCTGGACGTGAAGAACAACCCCTACCTGATCAAGGCCCTCTACGGCCTG
CTCATGCTCCTGCCGCAGAGCAGCGCCTTCCAGCTGCTCTCGCACCGGCTCCAGTGCGTGCCCAACCCTG
AGCTGCTGCAGACCGAAGACAGTCTAAAGGCAGCCCCCAAGTCCCAGAAAGCTGACTCCCCTAGCATCGA
CTACGCAGAGCTGCTGCAGCACTTTGAGAAGGTCCAGAACAAGCACCTGGAAGTGCGGCACCAGCGGAGC
GGGCGTGGGGACCACCTGGACCGGAGGGTTGTCCTCTGA

Translation (782 aa):
MNPEKDFAPLTPNIVRALNDKLYEKRKVAALEIEKLVREFVAQNNTVQIKHVIQTLSQEFALSQHPHSRK
GGLIGLAACSIALGKDSGLYLKELIEPVLTCFNDADSRLRYYACEALYNIVKVARGAVLPHFNVLFDGLS
KLAADPDPNVKSGSELLDRLLKDIVTESNKFDLVSFIPLLRERIYSNNQYARQFIISWILVLESVPDINL
LDYLPEILDGLFQILGDNGKEIRKMCEVVLGEFLKEIKKNPSSVKFAEMANILVIHCQTTDDLIQLTAMC
WMREFIQLAGRVMLPYSSGILTAVLPCLAYDDRKKSIKEVANVCNQSLMKLVTPEDDELDELRPGQRQAE
PTPDDALPKQEGTASGGPDGSCDSSFSSGISVFTAASTERAPVTLHLDGIVQVLNCHLSDTAIGMMTRIA
VLKWLYHLYIKTPRKMFRHTDSLFPILLQTLSDESDEVILKDLEVLAEIASSPAGQTDDPGPLDGPDLQA
SHSELQVPTPGRAGLLNTSGTKGLECSPSTPTMNSYFYKFMINLLKRFSSERKLLEVRGPFIIRQLCLLL
NAENIFHSMADILLREEDLKFASTMVHALNTILLTSTELFQLRNQLKDLKTLESQNLFCCLYRSWCHNPV
TTVSLCFLTQNYRHAYDLIQKFGDLEVTVDFLAEVDKLVQLIECPIFTYLRLQLLDVKNNPYLIKALYGL
LMLLPQSSAFQLLSHRLQCVPNPELLQTEDSLKAAPKSQKADSPSIDYAELLQHFEKVQNKHLEVRHQRS
GRGDHLDRRVVL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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