NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS69097.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
69097.1 Public Homo sapiens 6 KCTD20 24 110 108 CCDS HistoryNCBI Gene:222658Re-query CCDS DB by CCDS ID:69097.1Re-query CCDS DB by GeneID:222658See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 15, NCBI annotation release 105, Ensembl annotation release 74

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 69097.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000536244.5 ENSP00000439118.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000536244.5Link to Ensembl Protein Viewer:ENSP00000439118.1Re-query CCDS DB by Nucleotide ID:ENST00000536244Re-query CCDS DB by Protein ID:ENSP00000439118
Original member Current member NCBI NM_001286580.2 NP_001273509.1 Accepted alive Link to Nucleotide Sequence:NM_001286580.2Link to Protein Sequence:NP_001273509.1Re-query CCDS DB by Nucleotide ID:NM_001286580Re-query CCDS DB by Protein ID:NP_001273509Link to BLAST:NP_001273509.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001273509.1 274 Q7Z5Y7-3 274 100% 0 0

Chromosomal Locations for CCDS 69097.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 36479122 36479223 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 36479591 36479711 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 36481562 36481759 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 36484714 36484824 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 36486883 36487175 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (825 nt):
ATGTTTGGACCAGGAAGAGAGTACAACTTCACTCGGCCCAATGAGAAGGGAGAGTATGAGATTGCTGAAG
GCATCAGTGCAACTGTATTTCGCACAGTGCTGGATTATTACAAAACCGGTATCATCAATTGTCCTGATGG
CATCTCTATCCCAGATCTTAGAGATACTTGTGATTATCTCTGCATTAATTTTGACTTCAACACTATCCGA
TGTCAAGATCTGAGTGCTTTACTCCATGAACTGTCTAATGACGGTGCTCATAAGCAGTTTGATCACTACC
TCGAAGAGCTCATCTTGCCCATCATGGTGGGCTGTGCCAAGAAAGGAGAACGAGAGTGCCACATTGTTGT
GCTGACGGATGAGGATTCTGTGGACTGGGATGAAGACCACCCTCCACCAATGGGGGAGGAATATTCCCAA
ATTCTTTATAGCTCCAAGCTCTACAGATTCTTCAAATATATTGAGAATAGGGATGTTGCAAAAACAGTGT
TAAAGGAACGGGGCCTAAAAAACATTCGCATTGGAATTGAAGGTTACCCTACCTGTAAAGAAAAAATTAA
GAGAAGGCCTGGCGGCCGGTCTGAAGTCATCTATAATTATGTACAACGCCCCTTCATCCAGATGTCATGG
GAAAAGGAAGAAGGGAAGAGTCGCCATGTGGATTTCCAGTGTGTTCGAAGCAAATCCCTCACGAATCTGG
TAGCTGCTGGAGATGATGTCTTGGAGGACCAGGAGATATTAATGCATCACCCACCCCAAGTGGATGAACT
TGACCGGCTAAATGCCCCACTTTCTCAGATGGCTTCTAACGACTTTCAGGATTAG

Translation (274 aa):
MFGPGREYNFTRPNEKGEYEIAEGISATVFRTVLDYYKTGIINCPDGISIPDLRDTCDYLCINFDFNTIR
CQDLSALLHELSNDGAHKQFDHYLEELILPIMVGCAKKGERECHIVVLTDEDSVDWDEDHPPPMGEEYSQ
ILYSSKLYRFFKYIENRDVAKTVLKERGLKNIRIGIEGYPTCKEKIKRRPGGRSEVIYNYVQRPFIQMSW
EKEEGKSRHVDFQCVRSKSLTNLVAAGDDVLEDQEILMHHPPQVDELDRLNAPLSQMASNDFQD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH