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Report for CCDS10898.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10898.1 Public Homo sapiens 16 CMTR2 24 110 108 CCDS HistoryNCBI Gene:55783Re-query CCDS DB by CCDS ID:10898.1See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10898.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000338099.9 ENSP00000337512.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000338099.9Link to Ensembl Protein Viewer:ENSP00000337512.5Re-query CCDS DB by Nucleotide ID:ENST00000338099Re-query CCDS DB by Protein ID:ENSP00000337512
Original member Current member EBI ENST00000434935.7 ENSP00000411148.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000434935.7Link to Ensembl Protein Viewer:ENSP00000411148.2Re-query CCDS DB by Nucleotide ID:ENST00000434935Re-query CCDS DB by Protein ID:ENSP00000411148
Original member Current member NCBI NM_001099642.2 NP_001093112.1 Accepted alive Link to Nucleotide Sequence:NM_001099642.2Link to Protein Sequence:NP_001093112.1Re-query CCDS DB by Nucleotide ID:NM_001099642Re-query CCDS DB by Protein ID:NP_001093112Link to BLAST:NP_001093112.1
Original member Current member NCBI NM_001324374.2 NP_001311303.1 Accepted alive Link to Nucleotide Sequence:NM_001324374.2Link to Protein Sequence:NP_001311303.1Re-query CCDS DB by Nucleotide ID:NM_001324374Re-query CCDS DB by Protein ID:NP_001311303Link to BLAST:NP_001311303.1
Original member Current member NCBI NM_001324377.2 NP_001311306.1 Accepted alive Link to Nucleotide Sequence:NM_001324377.2Link to Protein Sequence:NP_001311306.1Re-query CCDS DB by Nucleotide ID:NM_001324377Re-query CCDS DB by Protein ID:NP_001311306Link to BLAST:NP_001311306.1
Original member Current member NCBI NM_001324378.2 NP_001311307.1 Accepted alive Link to Nucleotide Sequence:NM_001324378.2Link to Protein Sequence:NP_001311307.1Re-query CCDS DB by Nucleotide ID:NM_001324378Re-query CCDS DB by Protein ID:NP_001311307Link to BLAST:NP_001311307.1
Original member Current member NCBI NM_001324379.2 NP_001311308.1 Accepted alive Link to Nucleotide Sequence:NM_001324379.2Link to Protein Sequence:NP_001311308.1Re-query CCDS DB by Nucleotide ID:NM_001324379Re-query CCDS DB by Protein ID:NP_001311308Link to BLAST:NP_001311308.1
Original member Current member NCBI NM_018348.6 NP_060818.4 MANE Select Accepted alive Link to Nucleotide Sequence:NM_018348.6Link to Protein Sequence:NP_060818.4Re-query CCDS DB by Nucleotide ID:NM_018348Re-query CCDS DB by Protein ID:NP_060818Link to BLAST:NP_060818.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001093112.1 770 Q8IYT2 770 100% 0 0
NP_001311303.1 770 Q8IYT2 770 100% 0 0
NP_001311306.1 770 Q8IYT2 770 100% 0 0
NP_001311307.1 770 Q8IYT2 770 100% 0 0
NP_001311308.1 770 Q8IYT2 770 100% 0 0
NP_060818.4 770 Q8IYT2 770 100% 0 0

Chromosomal Locations for CCDS 10898.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 71283608 71285920 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2313 nt):
ATGAGTAAGTGCAGAAAGACACCAGTTCAGCAGCTAGCAAGTCCCGCGTCATTCAGCCCAGATATTCTTG
CTGACATTTTTGAACTCTTTGCCAAGAACTTTTCTTATGGCAAGCCACTTAATAATGAGTGGCAGTTACC
AGATCCCAGTGAGATTTTCACCTGTGACCACACTGAACTTAATGCATTTCTTGATTTGAAGAACTCCCTA
AATGAAGTAAAAAACCTACTGAGTGATAAGAAACTGGATGAGTGGCATGAGCACACTGCTTTCACTAATA
AAGCGGGGAAAATCATTTCTCATGTTAGAAAATCTGTGAATGCTGAACTTTGTACTCAAGCATGGTGTAA
GTTCCATGAGATTTTGTGCAGCTTTCCACTTATTCCACAGGAAGCTTTTCAGAATGGAAAACTGAATTCT
CTACACCTTTGTGAAGCTCCAGGAGCTTTTATAGCTAGTCTCAACCACTACTTAAAATCCCATCGGTTTC
CTTGTCATTGGAGTTGGGTAGCGAATACTCTGAATCCATACCATGAAGCAAATGACGACCTCATGATGAT
TATGGATGACCGGCTTATTGCAAATACCTTGCACTGGTGGTACTTTGGTCCAGATAACACTGGTGATATC
ATGACCCTGAAATTCTTGACTGGACTTCAGAATTTCATAAGCAGCATGGCTACTGTTCACTTGGTCACTG
CAGATGGGAGTTTTGATTGCCAAGGAAACCCAGGTGAACAAGAAGCTTTAGTTTCTTCTTTGCATTACTG
TGAAGTTGTCACTGCTCTGACCACTCTTGGAAACGGTGGCTCTTTTGTTCTAAAGATGTTTACTATGTTT
GAACATTGTTCCATAAACTTGATGTACCTGCTAAACTGTTGTTTTGACCAAGTCCATGTTTTCAAACCTG
CTACTAGCAAGGCAGGAAACTCCGAAGTCTATGTGGTTTGCCTCCACTATAAGGGGAGAGAGGCCATCCA
TCCTCTGTTATCTAAGATGACCTTGAATTTTGGGACTGAAATGAAAAGGAAAGCCCTTTTTCCCCATCAT
GTGATTCCTGATTCTTTTCTTAAGAGACATGAAGAATGTTGTGTGTTCTTTCATAAATATCAGCTAGAGA
CTATTTCTGAAAACATTCGTCTATTTGAGTGCATGGGAAAGGCGGAACAAGAAAAGCTGAATAATTTAAG
GGATTGTGCTATACAATATTTTATGCAAAAATTTCAACTGAAACATCTTTCCAGAAATAATTGGCTAGTA
AAAAAATCTAGTATTGGTTGTAGTACAAATACAAAATGGTTTGGGCAGAGGAACAAATATTTTAAAACTT
ATAATGAAAGGAAGATGCTAGAAGCCCTTTCATGGAAAGATAAAGTAGCCAAAGGATACTTTAATAGTTG
GGCTGAAGAACATGGTGTATATCATCCTGGGCAGAGTTCTATTTTAGAAGGAACAGCTTCCAATCTTGAG
TGTCACTTATGGCATATTTTGGAGGGAAAGAAACTGCCAAAGGTAAAATGTTCTCCTTTTTGCAATGGTG
AAATTTTAAAAACTCTTAATGAAGCAATTGAAAAGTCATTAGGAGGAGCTTTTAATTTGGATTCCAAGTT
TAGGCCAAAACAGCAGTATTCTTGTTCTTGTCATGTTTTTTCTGAAGAACTGATATTTTCCGAGTTGTGT
AGCCTTACTGAGTGCCTTCAGGATGAGCAGGTTGTAGTACCCAGCAATCAAATAAAGTGCCTGCTGGTGG
GCTTTTCGACTCTCCGTAATATCAAAATGCATATACCGTTGGAAGTTCGACTCCTAGAATCAGCTGAACT
CACAACTTTTAGCTGTTCATTGCTTCATGATGGAGATCCAACTTACCAGCGTTTATTTTTGGACTGCCTT
CTACATTCATTGCGGGAGCTTCATACAGGAGATGTTATGATTTTGCCTGTACTTTCTTGCTTCACAAGAT
TTATGGCTGGTTTGATCTTTGTACTCCACAGTTGTTTTAGATTCATCACTTTTGTTTGTCCCACATCCTC
TGATCCCCTGAGGACCTGCGCAGTCCTGCTATGTGTTGGTTATCAGGACCTTCCAAATCCAGTTTTCCGA
TATTTGCAGAGTGTGAATGAATTGTTGAGCACTTTGCTCAACTCTGACTCACCCCAGCAGGTTTTACAGT
TTGTGCCAATGGAGGTACTCCTTAAGGGGGCCCTGCTTGATTTTTTGTGGGATTTGAATGCTGCCATTGC
TAAAAGGCATTTGCATTTCATTATTCAAAGAGAGAGAGAAGAAATTATCAACAGCCTTCAGTTACAAAAC
TGA

Translation (770 aa):
MSKCRKTPVQQLASPASFSPDILADIFELFAKNFSYGKPLNNEWQLPDPSEIFTCDHTELNAFLDLKNSL
NEVKNLLSDKKLDEWHEHTAFTNKAGKIISHVRKSVNAELCTQAWCKFHEILCSFPLIPQEAFQNGKLNS
LHLCEAPGAFIASLNHYLKSHRFPCHWSWVANTLNPYHEANDDLMMIMDDRLIANTLHWWYFGPDNTGDI
MTLKFLTGLQNFISSMATVHLVTADGSFDCQGNPGEQEALVSSLHYCEVVTALTTLGNGGSFVLKMFTMF
EHCSINLMYLLNCCFDQVHVFKPATSKAGNSEVYVVCLHYKGREAIHPLLSKMTLNFGTEMKRKALFPHH
VIPDSFLKRHEECCVFFHKYQLETISENIRLFECMGKAEQEKLNNLRDCAIQYFMQKFQLKHLSRNNWLV
KKSSIGCSTNTKWFGQRNKYFKTYNERKMLEALSWKDKVAKGYFNSWAEEHGVYHPGQSSILEGTASNLE
CHLWHILEGKKLPKVKCSPFCNGEILKTLNEAIEKSLGGAFNLDSKFRPKQQYSCSCHVFSEELIFSELC
SLTECLQDEQVVVPSNQIKCLLVGFSTLRNIKMHIPLEVRLLESAELTTFSCSLLHDGDPTYQRLFLDCL
LHSLRELHTGDVMILPVLSCFTRFMAGLIFVLHSCFRFITFVCPTSSDPLRTCAVLLCVGYQDLPNPVFR
YLQSVNELLSTLLNSDSPQQVLQFVPMEVLLKGALLDFLWDLNAAIAKRHLHFIIQREREEIINSLQLQN


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
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