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Report for CCDS11269.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11269.1 Public Homo sapiens 17 UTP6 24 110 108 CCDS HistoryNCBI Gene:55813Re-query CCDS DB by CCDS ID:11269.1See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11269.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000261708.9 ENSP00000261708.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000261708.9Link to Ensembl Protein Viewer:ENSP00000261708.4Re-query CCDS DB by Nucleotide ID:ENST00000261708Re-query CCDS DB by Protein ID:ENSP00000261708
Original member Current member NCBI NM_018428.3 NP_060898.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_018428.3Link to Protein Sequence:NP_060898.2Re-query CCDS DB by Nucleotide ID:NM_018428Re-query CCDS DB by Protein ID:NP_060898Link to BLAST:NP_060898.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060898.2 597 Q9NYH9 597 100% 0 0

Chromosomal Locations for CCDS 11269.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 31863359 31863516 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 31865366 31865438 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 31868046 31868112 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 31873378 31873487 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 31873673 31873753 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 31875234 31875413 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 31878250 31878327 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 31878702 31878781 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 31880573 31880754 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 31884424 31884505 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 31885980 31886061 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 31887236 31887313 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 31889285 31889403 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 31892260 31892323 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 31892747 31892794 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 31894645 31894737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 31894970 31895011 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 31899646 31899730 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 31901536 31901627 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1794 nt):
ATGGCAGAGATAATTCAGGAACGCATAGAAGATCGGCTCCCGGAATTGGAACAGCTGGAGCGCATTGGAC
TGTTCAGTCATGCGGAGATTAAGGCTATCATTAAGAAGGCTTCCGATCTAGAGTACAAAATCCAGAGAAG
AACCCTTTTCAAGGAAGACTTTATCAATTATGTTCAATATGAAATTAATCTTTTGGAGCTGATCCAGAGA
AGAAGAACACGCATTGGATATTCATTTAAGAAGGATGAGATTGAGAATTCTATTGTACACCGGGTACAAG
GTGTTTTCCAGCGTGCCTCAGCAAAATGGAAAGACGATGTTCAACTTTGGCTCTCCTATGTGGCTTTTTG
TAAGAAGTGGGCTACTAAAACTCGACTTAGCAAGGTATTCTCTGCCATGTTGGCGATTCATTCCAACAAA
CCAGCTTTGTGGATTATGGCAGCCAAATGGGAAATGGAAGATCGATTGTCTTCAGAAAGCGCAAGGCAAC
TATTTCTTCGCGCACTGCGCTTTCATCCAGAGTGCCCAAAACTTTATAAAGAATACTTTAGGATGGAGCT
GATGCATGCTGAAAAACTGAGGAAGGAGAAGGAAGAATTTGAAAAAGCCAGTATGGATGTGGAGAATCCT
GATTATTCTGAAGAAATCCTTAAGGGCGAGTTGGCATGGATCATCTACAAAAATTCTGTAAGCATAATTA
AAGGTGCAGAATTTCACGTGTCACTGCTTTCGATTGCACAGCTATTTGACTTTGCCAAAGATCTACAAAA
AGAGATTTATGATGACCTTCAGGCTCTACACACAGATGATCCTCTCACTTGGGATTATGTGGCAAGGCGA
GAATTAGAGATTGAGTCACAGACAGAAGAGCAGCCTACAACGAAACAAGCCAAAGCAGTGGAGGTCGGCC
GGAAGGAGGAGAGGTGCTGTGCTGTGTATGAAGAGGCAGTGAAGACTCTGCCAACAGAGGCCATGTGGAA
GTGTTACATCACCTTTTGCTTGGAAAGATTTACTAAGAAGTCAAATAGTGGGTTCCTTAGAGGGAAGAGG
TTGGAAAGAACCATGACTGTATTCAGGAAGGCACATGAACTGAAGCTTCTGTCAGAATGCCAATACAAGC
AGTTGAGTGTTTCGTTGCTGTGTTATAACTTCCTGAGGGAAGCTCTGGAAGTGGCAGTAGCTGGAACTGA
ATTGTTTAGAGACTCTGGGACAATGTGGCAGCTGAAGCTGCAGGTGCTGATCGAGTCAAAGAGCCCTGAC
ATAGCCATGCTTTTTGAAGAAGCCTTTGTGCACCTGAAACCCCAGGTTTGTCTGCCATTGTGGATTTCCT
GGGCAGAGTGGAGTGAAGGTGCCAAAAGCCAAGAAGACACTGAGGCAGTCTTTAAGAAAGCTCTCTTAGC
TGTCATAGGTGCCGACTCAGTAACCCTGAAGAATAAGTACCTGGATTGGGCTTATCGAAGTGGTGGCTAC
AAAAAGGCCAGAGCTGTGTTTAAAAGTTTACAGGAGAGCCGACCATTTTCAGTTGACTTTTTCAGGAAAA
TGATTCAGTTTGAAAAGGAGCAAGAATCCTGCAATATGGCGAACATAAGAGAATATTATGAGAGAGCTTT
GAGAGAGTTTGGATCCGCAGATTCTGATCTTTGGATGGATTATATGAAAGAAGAATTGAACCACCCCCTT
GGTAGACCTGAGAACTGTGGACAGATCTACTGGCGAGCGATGAAAATGTTGCAGGGAGAGTCAGCAGAGG
CATTTGTAGCTAAACATGCTATGCATCAGACTGGCCATTTATGA

Translation (597 aa):
MAEIIQERIEDRLPELEQLERIGLFSHAEIKAIIKKASDLEYKIQRRTLFKEDFINYVQYEINLLELIQR
RRTRIGYSFKKDEIENSIVHRVQGVFQRASAKWKDDVQLWLSYVAFCKKWATKTRLSKVFSAMLAIHSNK
PALWIMAAKWEMEDRLSSESARQLFLRALRFHPECPKLYKEYFRMELMHAEKLRKEKEEFEKASMDVENP
DYSEEILKGELAWIIYKNSVSIIKGAEFHVSLLSIAQLFDFAKDLQKEIYDDLQALHTDDPLTWDYVARR
ELEIESQTEEQPTTKQAKAVEVGRKEERCCAVYEEAVKTLPTEAMWKCYITFCLERFTKKSNSGFLRGKR
LERTMTVFRKAHELKLLSECQYKQLSVSLLCYNFLREALEVAVAGTELFRDSGTMWQLKLQVLIESKSPD
IAMLFEEAFVHLKPQVCLPLWISWAEWSEGAKSQEDTEAVFKKALLAVIGADSVTLKNKYLDWAYRSGGY
KKARAVFKSLQESRPFSVDFFRKMIQFEKEQESCNMANIREYYERALREFGSADSDLWMDYMKEELNHPL
GRPENCGQIYWRAMKMLQGESAEAFVAKHAMHQTGHL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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