CCDS Home FTP Process Releases & Statistics
Collaborators EBI HGNC MGI NCBI
Contact Us email CCDS
Genome Displays Related Resources Gene HomoloGene MANE RefSeq
|
|
Report for CCDS42919.2 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
42919.2 |
Public |
Homo sapiens |
21 |
EPCIP |
24 |
110 |
108 |
|
Public Note for CCDS 42919.1 |
The coding region has been updated to correct an indel in the CDS, which results in a shorter protein C-terminus that is better supported by transcript and conservation data. |
Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47
Review status: Reviewed (by RefSeq, Havana and CCDS collaboration) Sequence IDs included in CCDS 42919.2
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
|
|
EBI |
ENST00000487113.1 |
ENSP00000418511.1 |
|
Accepted |
alive |
|
|
|
EBI |
ENST00000479548.2 |
ENSP00000418653.1 |
MANE Select |
Accepted |
alive |
|
|
|
EBI |
ENST00000490358.5 |
ENSP00000418830.1 |
|
Accepted |
alive |
|
|
|
NCBI |
NM_001162495.3 |
NP_001155967.2 |
MANE Select |
Accepted |
alive |
|
|
|
NCBI |
NM_001162496.3 |
NP_001155968.2 |
|
Accepted |
alive |
|
|
|
NCBI |
NM_019596.6 |
NP_062542.5 |
|
Accepted |
alive |
|
Chromosomal Locations for CCDS 42919.2
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (660 nt): ATGGCACCACCTTCCAGGCACTGTCTTCTTCTGATCAGCACTCTGGGTGTCTTTGCACTTAACTGCTTCA CCAAAGGTCAGAAGAACAGCACGCTCATCTTCACAAGGGAAAACACCATTCGGAACTGCAGCTGTTCTGC GGACATCCGGGATTGTGACTACAGTTTGGCCAACCTGATGTGCAACTGTAAAACCGTCCTGCCCCTTGCA GTAGAGCGAACCAGCTACAATGGCCATCTGACCATCTGGTTCACGGACACATCTGCGCTGGGCCACCTGC TGAACTTCACGCTGGTCCAAGACCTGAAGCTTTCCCTGTGCAGCACCAACACTCTCCCCACTGAATACCT GGCTATTTGTGGTCTGAAGAGGCTGCGCATCAACATGGAGGCCAAGCATCCCTTCCCAGAGCAGAGCTTA CTCATCCATAGCGGTGGGGACAGTGACTCCAGAGAGAAGCCCATGTGGTTACACAAAGGCTGGCAGCCAT GTATGTATATCTCATTCTTAGATATGGCTCTTTTCAACAGGGACTCAGCCTTAAAATCATATAGTATTGA AAACGTTACCAGCATTGCCAACAACTTTCCTGACTTTTCTTACTTTAGAACCTTCCCAATGCCAAGCAAC AAAAGCTATGTTGTCACATTTATTTACTAG
Translation (219 aa): MAPPSRHCLLLISTLGVFALNCFTKGQKNSTLIFTRENTIRNCSCSADIRDCDYSLANLMCNCKTVLPLA VERTSYNGHLTIWFTDTSALGHLLNFTLVQDLKLSLCSTNTLPTEYLAICGLKRLRINMEAKHPFPEQSL LIHSGGDSDSREKPMWLHKGWQPCMYISFLDMALFNRDSALKSYSIENVTSIANNFPDFSYFRTFPMPSN KSYVVTFIY
|