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Report for CCDS75415.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
75415.1 Public Homo sapiens 6 ZSCAN26 24 110 108 CCDS HistoryNCBI Gene:7741Re-query CCDS DB by CCDS ID:75415.1Re-query CCDS DB by GeneID:7741See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 75415.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000611552.2 ENSP00000478769.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000611552.2Link to Ensembl Protein Viewer:ENSP00000478769.1Re-query CCDS DB by Nucleotide ID:ENST00000611552Re-query CCDS DB by Protein ID:ENSP00000478769
Original member Current member NCBI NM_001287422.2 NP_001274351.1 Accepted alive Link to Nucleotide Sequence:NM_001287422.2Link to Protein Sequence:NP_001274351.1Re-query CCDS DB by Nucleotide ID:NM_001287422Re-query CCDS DB by Protein ID:NP_001274351Link to BLAST:NP_001274351.1

Chromosomal Locations for CCDS 75415.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 28276284 28277096 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (813 nt):
ATGGAGGCTCATAATGAGGGCTCTAACTTGGAAAGGCATCAGGCCAAGCCCAAAGAGAAGATTGAGTATA
AATGCTCAGAACGTGAGCAGAGATTCATCCAGCACTTGGACCTGATTGAACATGCGAGTACACACACGGG
AAAGAAACTCTGCGAGTCTGATGTGTGTCAGAGTTCCAGTCTTACAGGACATAAGAAAGTCCTCTCTAGA
GAGAAAGGTCATCAGTGTCATGAGTGTGGGAAAGCCTTTCAGAGGAGTTCACACCTCGTCAGACATCAGA
AAATCCATCTTGGTGAGAAGCCTTATCAGTGCAATGAGTGTGGCAAAGTCTTTAGCCAGAATGCAGGCCT
TTTGGAACATCTCAGAATTCATACTGGAGAGAAACCTTATCTATGTATCCATTGTGGAAAAAATTTTAGG
CGCAGCTCTCACCTTAATCGACATCAGAGAATTCACAGTCAGGAGGAGCCCTGTGAGTGCAAGGAGTGTG
GAAAAACCTTTAGTCAGGCCTTACTCCTCACCCACCATCAGAGAATCCATAGTCACTCCAAAAGCCATCA
ATGTAACGAGTGTGGAAAAGCTTTCAGTTTGACCTCAGACCTTATTCGACACCACAGAATTCATACTGGA
GAAAAACCTTTCAAGTGTAACATATGCCAGAAAGCCTTCCGACTAAACTCACACCTTGCTCAGCATGTAA
GAATCCACAATGAAGAAAAACCCTATCAGTGTAGTGAATGTGGAGAAGCCTTCAGGCAAAGGTCAGGTCT
TTTTCAACATCAGAGATATCACCACAAAGACAAACTGGCTTGA

Translation (270 aa):
MEAHNEGSNLERHQAKPKEKIEYKCSEREQRFIQHLDLIEHASTHTGKKLCESDVCQSSSLTGHKKVLSR
EKGHQCHECGKAFQRSSHLVRHQKIHLGEKPYQCNECGKVFSQNAGLLEHLRIHTGEKPYLCIHCGKNFR
RSSHLNRHQRIHSQEEPCECKECGKTFSQALLLTHHQRIHSHSKSHQCNECGKAFSLTSDLIRHHRIHTG
EKPFKCNICQKAFRLNSHLAQHVRIHNEEKPYQCSECGEAFRQRSGLFQHQRYHHKDKLA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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