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Report for CCDS35317.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35317.1 Public Homo sapiens X NALF2 24 110 108 CCDS HistoryNCBI Gene:27112Re-query CCDS DB by CCDS ID:35317.1Re-query CCDS DB by GeneID:27112See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 35317.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000252338.5 ENSP00000252338.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000252338.5Link to Ensembl Protein Viewer:ENSP00000252338.5Re-query CCDS DB by Nucleotide ID:ENST00000252338Re-query CCDS DB by Protein ID:ENSP00000252338
Original member Current member NCBI NM_015686.3 NP_056501.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015686.3Link to Protein Sequence:NP_056501.2Re-query CCDS DB by Nucleotide ID:NM_015686Re-query CCDS DB by Protein ID:NP_056501Link to BLAST:NP_056501.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_056501.2 472 O75949 472 100% 0 0

Chromosomal Locations for CCDS 35317.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 69505283 69506143 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 69528993 69529164 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 69529571 69529956 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1419 nt):
ATGTTCAGGGGCGCTTGGATGTGGCCCGGGAAAGACGCCGCCGCGCTGACTATCTGCTGCTGCTGCTGCT
GCTGGGCTCCCAGGCCGAGCGACAAACCTTGCGCCGACTCCGAGCGGGCGCAGCGATGGCGACTGTCCCT
GGCGTCCCTGCTCTTCTTCACCGTGCTGCTCGCTGACCATCTGTGGCTGTGCGCGGGGGCCCGGCCCCGG
GCCAGGGAGCTGAGCAGCGCCATGCGGCCCCCATGGGGGGCCGGCCGGGAGCGGCAGCCGGTGCCTCCTC
GCGCGGTGCTGCCGCTGCCGCCGCCGCCGCCCGGCGAGCCCAGCGCGCCCCCAGGCACCTGCGGCCCCAG
ATACAGCAACCTGACCAAAGCCGCCCCCGCCGCCGGCTCTCGGCCGGTCTGCGGCGGCGTCCCAGAGCCC
ACGGGGCTGGACGCAGCTTGCACCAAATTGCAATCTTTGCAGAGACTTTTCGAACCGACTACTCCGGCCC
CCCCTCTGCGGCCCCCTGACTCCCTTTCCCGTGCCCCGGCCGAGTTCCCCTCCGCCAAAAAAAACTTGCT
CAAAGGCCACTTTCGGAACTTCACTCTCTCCTTTTGCGACACCTACACGGTCTGGGACTTGCTGCTGGGC
ATGGACCGCCCCGACAGCCTGGACTGTAGCCTGGACACCCTGATGGGGGACCTGCTGGCCGTGGTGGCCA
GCCCGGGCTCCGGGGCCTGGGAGGCGTGTAGCAACTGTATCGAGGCGTACCAGCGGCTGGACCGACACGC
TCAGGAAAAATATGACGAGTTCGACCTCGTGCTGCATAAATACTTACAGGCGGAAGAGTACTCAATCCGG
TCCTGCACGAAAGGCTGTAAGGCTGTCTACAAGGCCTGGCTGTGCTCAGAATACTTCAGCGTGACCCAGC
AGGAATGCCAGCGCTGGGTGCCCTGCAAGCAATACTGCCTGGAGGTGCAGACCCGGTGCCCCTTTATACT
CCCCGACAATGAGGAAATGGTGTACGGAGGGCTCCCTGGCTTTATCTGTACAGGGTTGCTGGATACTTCA
CCAAAGCGTCTGGAAACCAAGTGCTGTGACGTGCAGTGGGTCTCCTGTGAGGCGAAGAAGAAGAAGTTCA
AGGAGTCTGAGGCCCCCAAAACCCACCAGCAGCAATTCCACCACTCCTATTTCCACCACTACCACCAACA
GTACCATCACTACCACCCCCATCATGATCCCCCAGGCCGTGTCAGCAACAAGCCCGCCCTGCTGCCGGTC
TCTGGGGGCTCCCGCCTCAGCCCTAGCAGGATCCGGCTCTGCGTCCTTGTTCTCATGCTCCTCCATACCG
TGGTGTCCTTCTCCAGCAACCAGGGTGGTGGGGGATTGGGGCTGGAGACACTGCCTGCCCTAGAGGAGGG
CCTGACACGGGAAGAGTGA

Translation (472 aa):
MFRGAWMWPGKDAAALTICCCCCCWAPRPSDKPCADSERAQRWRLSLASLLFFTVLLADHLWLCAGARPR
ARELSSAMRPPWGAGRERQPVPPRAVLPLPPPPPGEPSAPPGTCGPRYSNLTKAAPAAGSRPVCGGVPEP
TGLDAACTKLQSLQRLFEPTTPAPPLRPPDSLSRAPAEFPSAKKNLLKGHFRNFTLSFCDTYTVWDLLLG
MDRPDSLDCSLDTLMGDLLAVVASPGSGAWEACSNCIEAYQRLDRHAQEKYDEFDLVLHKYLQAEEYSIR
SCTKGCKAVYKAWLCSEYFSVTQQECQRWVPCKQYCLEVQTRCPFILPDNEEMVYGGLPGFICTGLLDTS
PKRLETKCCDVQWVSCEAKKKKFKESEAPKTHQQQFHHSYFHHYHQQYHHYHPHHDPPGRVSNKPALLPV
SGGSRLSPSRIRLCVLVLMLLHTVVSFSSNQGGGGLGLETLPALEEGLTREE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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