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Report for CCDS32869.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32869.1 Public Homo sapiens 19 NCLN 24 110 108 CCDS HistoryNCBI Gene:56926Re-query CCDS DB by CCDS ID:32869.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32869.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000246117.9 ENSP00000246117.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000246117.9Link to Ensembl Protein Viewer:ENSP00000246117.3Re-query CCDS DB by Nucleotide ID:ENST00000246117Re-query CCDS DB by Protein ID:ENSP00000246117
Original member Current member NCBI NM_020170.4 NP_064555.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020170.4Link to Protein Sequence:NP_064555.2Re-query CCDS DB by Nucleotide ID:NM_020170Re-query CCDS DB by Protein ID:NP_064555Link to BLAST:NP_064555.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_064555.2 563 Q969V3-1 563 100% 0 0

Chromosomal Locations for CCDS 32869.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 3186031 3186214 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 3192470 3192660 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 3193284 3193428 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 3196183 3196277 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 3198817 3198897 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 3201523 3201626 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 3203756 3203844 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 3204005 3204144 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 3204573 3204751 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 3205939 3206026 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 3206152 3206190 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 3206262 3206425 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 3207198 3207251 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 3207391 3207469 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 3207629 3207688 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1692 nt):
ATGCTGGAGGAAGCGGGCGAGGTGCTGGAGAACATGCTGAAGGCGTCTTGTCTGCCGCTCGGCTTCATCG
TCTTCCTGCCCGCTGTGCTGCTGCTGGTGGCGCCGCCGCTGCCTGCCGCCGACGCCGCGCACGAGTTCAC
CGTGTACCGCATGCAGCAGTACGACCTGCAGGGCCAGCCCTACGGCACACGGAATGCAGTGCTGAACACG
GAGGCGCGCACGATGGCGGCGGAGGTGCTGAGCCGCCGCTGCGTGCTCATGCGGCTACTGGACTTCTCCT
ACGAGCAGTACCAGAAGGCCCTGCGGCAGTCGGCGGGCGCCGTGGTCATCATCCTGCCCAGGGCCATGGC
CGCCGTGCCCCAGGACGTCGTCCGGCAATTCATGGAGATCGAGCCGGAGATGCTGGCCATGGAGACCGCC
GTCCCCGTGTACTTTGCCGTGGAGGACGAGGCCCTGCTGTCTATCTACAAGCAGACCCAGGCTGCCTCCG
CCTCCCAGGGCTCCGCCTCTGCTGCTGAAGTACTGCTGCGCACGGCCACTGCCAACGGCTTCCAGATGGT
CACCAGCGGGGTACAGAGCAAGGCCGTGAGTGACTGGCTGATTGCCAGCGTGGAGGGGCGGCTGACGGGG
CTGGGCGGAGAGGACCTTCCCACCATCGTCATCGTGGCCCACTACGACGCCTTTGGAGTGGCCCCCTGGC
TGTCGCTGGGCGCGGACTCCAACGGGAGCGGCGTCTCTGTGCTGCTGGAGCTGGCACGCCTCTTCTCCCG
GCTCTACACCTACAAGCGCACGCACGCCGCCTACAACCTCCTGTTCTTTGCGTCTGGAGGAGGCAAGTTT
AACTACCAGGGAACCAAGCGCTGGCTGGAAGACAACCTGGACCACACAGACTCCAGCCTGCTTCAGGACA
ATGTGGCCTTCGTGCTGTGCCTGGACACCGTGGGCCGGGGCAGCAGCCTGCACCTGCACGTGTCCAAGCC
GCCTCGGGAGGGCACCCTGCAGCACGCCTTCCTGCGGGAGCTGGAGACGGTGGCCGCGCACCAGTTCCCT
GAGGTACGGTTCTCCATGGTGCACAAGCGGATCAACCTGGCGGAGGACGTGCTGGCCTGGGAGCACGAGC
GCTTCGCCATCCGCCGACTGCCCGCCTTCACGCTGTCCCACCTGGAGAGCCACCGTGACGGCCAGCGCAG
CAGCATCATGGACGTGCGGTCCCGGGTGGATTCTAAGACCCTGACCCGTAACACGAGGATCATTGCAGAG
GCCCTGACTCGAGTCATCTACAACCTGACAGAGAAGGGGACACCCCCAGACATGCCGGTGTTCACAGAGC
AGATGCAGATCCAGCAGGAGCAGCTGGACTCGGTGATGGACTGGCTCACCAACCAGCCGCGGGCCGCGCA
GCTGGTGGACAAGGACAGCACCTTCCTCAGCACGCTGGAGCACCACCTGAGCCGCTACCTGAAGGACGTG
AAGCAGCACCACGTCAAGGCTGACAAGCGGGACCCAGAGTTTGTCTTCTACGACCAGCTGAAGCAAGTGA
TGAATGCGTACAGAGTCAAGCCGGCCGTCTTTGACCTGCTCCTGGCTGTTGGCATTGCTGCCTACCTCGG
CATGGCCTACGTGGCTGTCCAGCACTTCAGCCTCCTCTACAAGACCGTCCAGAGGCTGCTCGTGAAGGCC
AAGACACAGTGA

Translation (563 aa):
MLEEAGEVLENMLKASCLPLGFIVFLPAVLLLVAPPLPAADAAHEFTVYRMQQYDLQGQPYGTRNAVLNT
EARTMAAEVLSRRCVLMRLLDFSYEQYQKALRQSAGAVVIILPRAMAAVPQDVVRQFMEIEPEMLAMETA
VPVYFAVEDEALLSIYKQTQAASASQGSASAAEVLLRTATANGFQMVTSGVQSKAVSDWLIASVEGRLTG
LGGEDLPTIVIVAHYDAFGVAPWLSLGADSNGSGVSVLLELARLFSRLYTYKRTHAAYNLLFFASGGGKF
NYQGTKRWLEDNLDHTDSSLLQDNVAFVLCLDTVGRGSSLHLHVSKPPREGTLQHAFLRELETVAAHQFP
EVRFSMVHKRINLAEDVLAWEHERFAIRRLPAFTLSHLESHRDGQRSSIMDVRSRVDSKTLTRNTRIIAE
ALTRVIYNLTEKGTPPDMPVFTEQMQIQQEQLDSVMDWLTNQPRAAQLVDKDSTFLSTLEHHLSRYLKDV
KQHHVKADKRDPEFVFYDQLKQVMNAYRVKPAVFDLLLAVGIAAYLGMAYVAVQHFSLLYKTVQRLLVKA
KTQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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