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Report for CCDS46143.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46143.1 Public Homo sapiens 19 PRR12 24 110 108 CCDS HistoryNCBI Gene:57479Re-query CCDS DB by CCDS ID:46143.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)


Attributes
Inferred exon combination

Sequence IDs included in CCDS 46143.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000418929.7 ENSP00000394510.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000418929.7Link to Ensembl Protein Viewer:ENSP00000394510.1Re-query CCDS DB by Nucleotide ID:ENST00000418929Re-query CCDS DB by Protein ID:ENSP00000394510
Original member Current member NCBI NM_020719.3 NP_065770.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020719.3Link to Protein Sequence:NP_065770.1Re-query CCDS DB by Nucleotide ID:NM_020719Re-query CCDS DB by Protein ID:NP_065770Link to BLAST:NP_065770.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_065770.1 2036 Q9ULL5-3 2036 100% 0 0

Chromosomal Locations for CCDS 46143.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 49591655 49591740 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49593327 49593439 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49594454 49594615 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49594697 49598013 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49599272 49599938 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49601491 49601918 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49614533 49614649 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49614876 49615009 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49615747 49616219 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49620352 49620477 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49621525 49621622 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49624844 49624990 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49625105 49625200 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49625461 49625607 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (6111 nt):
ATGGACAGGAACTACCCCAGCGCCGGCTTCGGGGACCCGCTCGGCGCCGGGGCGGGATGGAGTTACGAGA
GGTCAGCGAAAGCTAGCTTGGTTTATGGCAGCTCCAGGACCTCGCACCCCGAGACGGACATCTTACACCG
CCAGGCCTATGCGGCCCCCCACCCACTGCAAAGCTATGCCACCAACCACCACCCGGCAGGCCTCTCTGGA
CTCTTCGACACTGGCCTCCACCACGCGGGCTCAGCAGGGCCCGACGCCTCCGTCATGAACCTTATCTCGG
CCCTGGAATCCCGGGGCCCCCAGCCTGGCCCCTCCGCCTCCTCTCTCCTCTCCCAGTTCCGCAGTCCTTC
CTGGCAAACAGCCATGCACACGCCAGGCCCCACGGAGCTCTTCATCTCGGGTGCCCTGCCGGGTTCCAGC
ACCTTTCCGTCCTCATCTGCCCTGTCGGCTTACCAACACCCGGCTTCCTTCGGCAGCCGCCCCTTCCCAG
TGCCCTCGTCCCTCAGCCTCCAGGACCCCCCATTCAGCCCTCCAGCTAACGGGCTCCTGTCCCCTCATGA
CGTGCTGCACCTGAAGCCCTCGCAGGCACCCACGGTGCCCTCTTCACTGGGCTTCGAGCGCCTGGCAGGG
GGCGGTGTCTTGGGGCCAGCTGGTCTCGGTCCAGCCCAGACCCCCCCTTACCGCCCTGGCCCCCCAGACC
CACCACCACCTCCTCGCCACCTCCCAACTCAGTTCAACCTGCTGGCTTCCTCTTCCGCTGCCGCCGCCGC
TGCCGAGCAGTCCTCCCCACAGCTCTATAACTTCTCGGGTGCTGCCCCGGGCCCACCGCCGCCTGAGCGG
GCCCTGCCACGCCAGGACACGGTCATCAAGCACTACCAGCGGCCAGCCAGTGCCCAGCCCCCACCACCCC
CGCCACCAGCCCATGCGCTCCAGCACTATCTGAGCTGTGGAGGCAGCTACCCCTCCATGGGCCACCGGGC
CAACCTGGCCTGCAGCCCCCTGGGTGGTGGGGAGCCCTCCCCGGGTGCTGGGGAGCCTAGCAAGGCTGGT
CCCAGCGGAGCCACGGCTGGGGCATCTGGCCGGGCCACGGGCCCTGAGGCAGCAGGGGGCGGTGGGGCTG
GGGGTGGTGGTGGAGGTTACCGCCCCATCATTCAGTCGCCTGGGTACAAGACGGGCAAAGGTGGTTATGG
AGCAGCTGCCGGGGGTGCCACCAGGCCCCCCCCACCCCGTTCGACCGCCACCCCCAAATGTCAGAGCCTG
GGTGGGCCAGCAGCCGCCTATGCCACTGGGAAGGCCTCTGGGGCTGGAGGGGCAGGGGGCCAGGCTTATT
CCCCCGGTCAGCCTCAAGGGCTTCTGGGACCCCAGGCCTACGGGCAAGGGTTTGGAGGGGGGCAGGCACA
GGACTTGAGCAAAGCCCCCAGCTACTCAGGGGGCCCCCCACAGCCCCCCAGCGGCCCCCCTCCTCCTGGC
CTGGCCACATGTCAGAGCTACTCCCCGGACCAGCTGCAGGGGCAGCTGTATGGGGTGCAGGGCGAGCCAT
ACCCAGGGCCAGCCGCCCACTCCCAGGGGCTGCCCACAGCCAGCCCCTCGCTCAGCTACAGTACCGGCCA
TTCCCCAGCGCTCTCGGGCCATGGGGGTGGCTGGGGACCCAGCTCCCTGGGAGGCGGCGGTGAGGCCAGC
CCATCTCACATCATTCGTCCGCTCCAGTCACCGCCTGCCACCGGCCGTCCACCTGGAGTCGGCTCTCCAG
GAGCCCCTGGCAAATACCTGAGCTCAGTCTTGGCCTCAGCGCCTTTCCTGGCACCTCCGGGAGCTGGCAG
CTATGCAGCCGGAGCAGGTGGCTACAAGGGCAAGGGGGATGGCTCGGAGCTGCTGGCGGGCCCAGGTGGG
CCTCCTGCGGAGCGCACAGAGGATGAGGAGTTCCTTATCCAGCACCTCTTGCAGGCGCCCAGCCCTCCTC
GGACCTCAGGGGCGGACGGCTTGGTGGGCGAGGACGGGGCAGCAGATGCCTCTAAGGGACTTGGGGGGAG
TGGCGGGGCCGGGGGACCACCGGGTACACCCTACGAGTTGGCCAAGGAAGACCCCCAGAGGTACCACCTG
CAGAGTGTCATCCGCACCAGTGCCAGCCTGGATGAGGGTGCCACTGCGGCACTGGAGCTGGGCCTGGGGA
GGCTGAAGGAGAAGAAGAAAGGGCCAGAGCGGGGTGGCGAGACCCCCGAGGGGCTGGCCACCTCTGTTGT
CCACTACGGGGCAGGCGCCAAGGAGCTGGGGGCCTTCTTGCAAAAGAGCCCTCCGCCCCCACCTCCCACG
GCCCAGTCTACCCAGCCCACTCCCCATGGCCTCCTTCTGGAGGCCGGGGGCCCTGACCTCCCACTGGTGC
TGCCTCCGCCTCCCCCCCAGCTGCTCCCCTCGGTCCTCAGCCATGCCCCCAGTCCCTCTCCCAGCGCCTC
CAAAGTCGGCGTCCACCTCCTTGAGCCAGCCACCCGCGATGGGGCACCCCAGCCACCTCCACCGCCACCC
CCGCCTCCACCACCCATGCCCCTGCAGCTCGAGGCCCACCTCCGCAGCCATGGCCTGGAGCCCGCGGCCC
CCAGCCCCCGCCTGCGACCCGAGGAGAGCCTGGATCCGCCAGGCGCCATGCAGGAATTGCTCGGGGCTCT
GGAGCCGCTGCCCCCGGCGCCTGGGGATACTGGCGTAGGCCCACCAAACTCGGAGGGCAAGGATCCCGCA
GGCGCCTACCGCAGCCCCAGCCCGCAAGGCACCAAGGCGCCGCGTTTCGTGCCGCTCACCTCCATCTGCT
TCCCTGACTCCTTGCTCCAAGACGAGGAGCGCAGCTTCTTCCCCACCATGGAGGAGATGTTCGGTGGAGG
GGCCGCGGACGACTACGGCAAGGCCGGGCCACCTGAGGACGAGGGGGACCCCAAGGCTGGCGCTGGGCCA
CCCCCCGGCCCCCCTGCTTATGATCCCTATGGGCCCTACTGTCCTGGCCGGGCGTCGGGAGCCGGGCCCG
AGACACCGGGCCTGGGCCTGGACCCCAACAAACCGCCTGAACTGCCCTCCACGGTCAACGCCGAGCCGCT
GGGCCTGATCCAGAGTGGCCCCCACCAGGCGGCGCCACCACCCCCGCCTCCGCCACCGCCGCCTCCCGCG
CCGGCCTCCGAACCCAAGGGTGGCCTCACCTCGCCCATCTTCTGCTCTACCAAGCCAAAGAAGCTGCTCA
AGACATCCTCCTTCCACCTGCTGCGGCGCCGCGACCCACCCTTCCAGACCCCCAAGAAGCTGTACGCCCA
GGAGTACGAGTTCGAGGCGGACGAGGACAAGGCCGATGTTCCCGCCGACATCCGCCTCAACCCCCGGCGC
TTGCCTGACCTGGTCTCCAGCTGCCGCTCCCGTCCGGCCCTCTCGCCACTGGGGGACATCGACTTCTGCC
CACCCAACCCAGGACCCGATGGCCCCCGGCGCCGTGGCCGCAAGCCCACGAAGGCGAAACGTGATGGGCC
ACCCCGGCCACGGGGGAGGCCCCGGATCCGCCCCCTGGAGGTCCCGACCACTGCGGGGCCCGCCTCGGCC
TCCACGCCCACCGATGGCGCCAAGAAACCCCGGGGCCGGGGCCGAGGCCGGGGTCGAAAGGCTGAGGAGG
CAGGGGGCACCCGGTTGGAGCCCCTGAAGCCACTTAAGATCAAGCTGTCTGTGCCCAAGGCTGGCGAGGG
TCTGGGAACCTCATCGGGTGATGCCATATCAGGCACTGACCACAACAGCCTGGACTCGAGCCTGACTCGG
GAGAAGATCGAGGCCAAGATTAAGGAGGTGGAGGAGAAGCAGCCGGAGATGAAGTCGGGTTTCATGGCCT
CCTTCTTGGACTTCCTCAAGTCAGGCAAGCGCCACCCACCACTCTACCAGGCGGGCCTGACGCCTCCGCT
CAGCCCTCCCAAGAGTGTGCCACCCTCTGTGCCAGCCCGAGGCCTGCAGCCCCAGCCCCCTGCCACCCCT
GCTGTGCCACATCCCCCACCTTCCGGAGCCTTTGGGCTTGGGGGCGCCCTGGAGGCTGCAGAGAGTGAGG
GTCTGGGGCTTGGCTGCCCTTCACCCTGCAAGCGGCTTGATGAGGAGCTGAAGCGGAACCTCGAGACGCT
GCCCTCCTTCTCCTCGGATGAGGAAGACTCTGTCGCCAAGAACCGAGACCTGCAGGAGAGCATCTCCTCC
GCCATCTCTGCCCTCGATGACCCACCCCTTGCTGGGCCAAAAGACACTTCCACCCCAGATGGGCCGCCCT
TGGCCCCCGCGGCTGCAGTTCCAGGGCCACCCCCTCTTCCGGGGCTCCCCAGTGCCAACAGCAATGGCAC
TCCCGAGCCCCCGCTGCTGGAGGAGAAACCCCCACCCACTCCACCTCCTGCCCCGACTCCTCAGCCTCAG
CCTCCGCCACCCCCTCCGCCGCCACAGCCAGCCCTGCCCTCGCCACCCCCGCTGGTGGCCCCCACGCCCA
GCTCACCACCGCCACCGCCGCTGCCGCCGCCACCTCCACCAGCCATGCCCTCGCCTCCACCACCACCCCC
ACCAGCCGCTGCCCCACTGGCTGCTCCTCCTGAGGAGCCCGCCGCCCCGTCTCCCGAAGACCCCGAGCTG
CCGGACACCCGGCCCCTGCATCTGGCCAAAAAGCAGGAGACGGCGGCAGTGTGTGGGGAGACGGACGAGG
AGGCCGGCGAGAGTGGCGGAGAGGGCATCTTCCGGGAACGGGACGAGTTCGTCATCCGTGCTGAGGACAT
CCCTTCCCTCAAGCTGGCGTTGCAGACGGGGCGTGAACCCCCACCCATCTGGCGAGTCCAGAAGGCCCTT
CTGCAGAAATTCACTCCGGAGATCAAGGACGGCCAGAGGCAGTTTTGTGCCACCAGTAATTATTTGGGGT
ATTTTGGGGATGCAAAAAATCGGTACCAGCGCCTCTATGTAAAGTTCCTGGAAAATGTCAATAAGAAGGA
CTACGTGAGGGTCTGTGCTCGGAAACCCTGGCATCGGCCCCCAGTGCCAGTCAGACGCTCTGGGCAGGCC
AAGAACCCCGTATCTGCTGGGGGTAGCTCTGCACCTCCCCCTAAGGCCCCAGCACCACCTCCCAAGCCTG
AGACCCCTGAAAAGACGACATCTGAGAAGCCCCCAGAGCAGACTCCTGAGACGGCCATGCCTGAGCCCCC
TGCCCCCGAGAAGCCCTCCCTCCTGCGGCCTGTTGAGAAGGAAAAGGAGAAGGAGAAGGTGACACGTGGA
GAGCGGCCATTGCGGGGTGAGCGGGCCACCAGCGGACGGCAGACACGGCCAGAGCGGAGTCTCGCCACGG
GACAACCTGCCACATCCCGGCTGCCCAAAGCCCGGCCTACCAAGGTGAAGGCTGAACCGCCCCCTAAGAA
GAGGAAGAAATGGCTGAAGGAGGCAGGCGGCAACGCTACAGCAGGCGGGGGCCCACCAGGCAGCTCCTCG
GACTCGGAGTCCTCCCCTGGAGCCCCCAGCGAGGACGAGCGGGCAGTACCTGGGCGTCTGCTCAAAACCA
GGGCGATGCGGGAGATGTACCGGAGCTACGTGGAGATGTTGGTGAGCACAGCACTTGACCCAGACATGAT
CCAGGCCCTGGAGGACACGCATGACGAGCTGTACCTGCCCCCCATGCGGAAGATAGACGGCCTGCTGAAT
GAGCACAAGAAGAAAGTCCTGAAGCGGCTGTCGCTAAGCCCAGCCCTGCAGGATGCTCTGCACACGTTCC
CACAGCTGCAAGTGGAGCAGAGTGGGGAGGGCTCTCCGGAAGAGGGGGCTGTGCGGCTGCGGCCTGCTGG
GGAACCCTACAACCGCAAGACGCTCAGCAAGCTCAAGAGGAGCGTGGTCAGAGCCCAGGAGTTCAAGGTT
GAGCTGGAAAAGTCGGGATACTATACACTCTACCATTCGCTCCACCACTATAAATACCACACCTTCCTGC
GCTGCCGGGACCAGACCCTGGCCATCGAGGGCGGCGCCGAGGACCTGGGCCAGGAGGAGGTGGTCCAGCA
GTGCATGCGGAACCAGCCGTGGCTGGAACAGCTCTTTGACTCCTTCAGTGACCTGCTGGCCCAAGCACAG
GCCCACAGCCGCTGCGGGTGA

Translation (2036 aa):
MDRNYPSAGFGDPLGAGAGWSYERSAKASLVYGSSRTSHPETDILHRQAYAAPHPLQSYATNHHPAGLSG
LFDTGLHHAGSAGPDASVMNLISALESRGPQPGPSASSLLSQFRSPSWQTAMHTPGPTELFISGALPGSS
TFPSSSALSAYQHPASFGSRPFPVPSSLSLQDPPFSPPANGLLSPHDVLHLKPSQAPTVPSSLGFERLAG
GGVLGPAGLGPAQTPPYRPGPPDPPPPPRHLPTQFNLLASSSAAAAAAEQSSPQLYNFSGAAPGPPPPER
ALPRQDTVIKHYQRPASAQPPPPPPPAHALQHYLSCGGSYPSMGHRANLACSPLGGGEPSPGAGEPSKAG
PSGATAGASGRATGPEAAGGGGAGGGGGGYRPIIQSPGYKTGKGGYGAAAGGATRPPPPRSTATPKCQSL
GGPAAAYATGKASGAGGAGGQAYSPGQPQGLLGPQAYGQGFGGGQAQDLSKAPSYSGGPPQPPSGPPPPG
LATCQSYSPDQLQGQLYGVQGEPYPGPAAHSQGLPTASPSLSYSTGHSPALSGHGGGWGPSSLGGGGEAS
PSHIIRPLQSPPATGRPPGVGSPGAPGKYLSSVLASAPFLAPPGAGSYAAGAGGYKGKGDGSELLAGPGG
PPAERTEDEEFLIQHLLQAPSPPRTSGADGLVGEDGAADASKGLGGSGGAGGPPGTPYELAKEDPQRYHL
QSVIRTSASLDEGATAALELGLGRLKEKKKGPERGGETPEGLATSVVHYGAGAKELGAFLQKSPPPPPPT
AQSTQPTPHGLLLEAGGPDLPLVLPPPPPQLLPSVLSHAPSPSPSASKVGVHLLEPATRDGAPQPPPPPP
PPPPPMPLQLEAHLRSHGLEPAAPSPRLRPEESLDPPGAMQELLGALEPLPPAPGDTGVGPPNSEGKDPA
GAYRSPSPQGTKAPRFVPLTSICFPDSLLQDEERSFFPTMEEMFGGGAADDYGKAGPPEDEGDPKAGAGP
PPGPPAYDPYGPYCPGRASGAGPETPGLGLDPNKPPELPSTVNAEPLGLIQSGPHQAAPPPPPPPPPPPA
PASEPKGGLTSPIFCSTKPKKLLKTSSFHLLRRRDPPFQTPKKLYAQEYEFEADEDKADVPADIRLNPRR
LPDLVSSCRSRPALSPLGDIDFCPPNPGPDGPRRRGRKPTKAKRDGPPRPRGRPRIRPLEVPTTAGPASA
STPTDGAKKPRGRGRGRGRKAEEAGGTRLEPLKPLKIKLSVPKAGEGLGTSSGDAISGTDHNSLDSSLTR
EKIEAKIKEVEEKQPEMKSGFMASFLDFLKSGKRHPPLYQAGLTPPLSPPKSVPPSVPARGLQPQPPATP
AVPHPPPSGAFGLGGALEAAESEGLGLGCPSPCKRLDEELKRNLETLPSFSSDEEDSVAKNRDLQESISS
AISALDDPPLAGPKDTSTPDGPPLAPAAAVPGPPPLPGLPSANSNGTPEPPLLEEKPPPTPPPAPTPQPQ
PPPPPPPPQPALPSPPPLVAPTPSSPPPPPLPPPPPPAMPSPPPPPPPAAAPLAAPPEEPAAPSPEDPEL
PDTRPLHLAKKQETAAVCGETDEEAGESGGEGIFRERDEFVIRAEDIPSLKLALQTGREPPPIWRVQKAL
LQKFTPEIKDGQRQFCATSNYLGYFGDAKNRYQRLYVKFLENVNKKDYVRVCARKPWHRPPVPVRRSGQA
KNPVSAGGSSAPPPKAPAPPPKPETPEKTTSEKPPEQTPETAMPEPPAPEKPSLLRPVEKEKEKEKVTRG
ERPLRGERATSGRQTRPERSLATGQPATSRLPKARPTKVKAEPPPKKRKKWLKEAGGNATAGGGPPGSSS
DSESSPGAPSEDERAVPGRLLKTRAMREMYRSYVEMLVSTALDPDMIQALEDTHDELYLPPMRKIDGLLN
EHKKKVLKRLSLSPALQDALHTFPQLQVEQSGEGSPEEGAVRLRPAGEPYNRKTLSKLKRSVVRAQEFKV
ELEKSGYYTLYHSLHHYKYHTFLRCRDQTLAIEGGAEDLGQEEVVQQCMRNQPWLEQLFDSFSDLLAQAQ
AHSRCG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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