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Report for CCDS32462.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32462.1 Public Homo sapiens 16 ZNF319 24 110 108 CCDS HistoryNCBI Gene:57567Re-query CCDS DB by CCDS ID:32462.1See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32462.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000299237.3 ENSP00000299237.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000299237.3Link to Ensembl Protein Viewer:ENSP00000299237.2Re-query CCDS DB by Nucleotide ID:ENST00000299237Re-query CCDS DB by Protein ID:ENSP00000299237
Original member Current member NCBI NM_001384365.1 NP_001371294.1 Accepted alive Link to Nucleotide Sequence:NM_001384365.1Link to Protein Sequence:NP_001371294.1Re-query CCDS DB by Nucleotide ID:NM_001384365Re-query CCDS DB by Protein ID:NP_001371294Link to BLAST:NP_001371294.1
Original member Current member NCBI NM_001384366.1 NP_001371295.1 Accepted alive Link to Nucleotide Sequence:NM_001384366.1Link to Protein Sequence:NP_001371295.1Re-query CCDS DB by Nucleotide ID:NM_001384366Re-query CCDS DB by Protein ID:NP_001371295Link to BLAST:NP_001371295.1
Original member Current member NCBI NM_001384367.1 NP_001371296.1 Accepted alive Link to Nucleotide Sequence:NM_001384367.1Link to Protein Sequence:NP_001371296.1Re-query CCDS DB by Nucleotide ID:NM_001384367Re-query CCDS DB by Protein ID:NP_001371296Link to BLAST:NP_001371296.1
Original member Current member NCBI NM_020807.3 NP_065858.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020807.3Link to Protein Sequence:NP_065858.1Re-query CCDS DB by Nucleotide ID:NM_020807Re-query CCDS DB by Protein ID:NP_065858Link to BLAST:NP_065858.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001371294.1 582 Q9P2F9 582 100% 0 0
NP_001371295.1 582 Q9P2F9 582 100% 0 0
NP_001371296.1 582 Q9P2F9 582 100% 0 0
NP_065858.1 582 Q9P2F9 582 100% 0 0

Chromosomal Locations for CCDS 32462.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 57996517 57998265 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1749 nt):
ATGTCGGAAAGCTGGCAACAGCCGCCACAGACGCAGCCGCAGCAGCCACAGCCACCGCAGCCTCAGCACC
AT
GCAGAGCCACCGCCAGCCCTGGCAGAGCACACGCTGCCTCCGGGCACGGCGGAGAACCCCCTGGGCTG
T
GCCGTCTATGGCATCCTCCTGCAGCCAGACCCCGGCCTGCAGCCCCCACAACACGCACCCCTGCAGGCA
GCA
GGAGAGCCAGGCCCCAAATGTGGCGTGTGTGGTCACGACCTGGCGCACCTGTCCAGTCCGCATGAGC
AC
CAGTGTCTGGCGGGCCATGACCGCTCATTCCAGTGCACACAGTGTCTCAAGATCTTCCACCAGGCCAC
T
GACCTGCTGGAGCACCAGTGCGTGCAGGCTGAGCAGAAGCCCTTCGTCTGTGGGGTCTGCAAGATGGGC
TTC
TCACTACTCACCTCACTGGCACAGCACCACAGCTCCCACAGTGGCCTGGTGAAGTGTTCCATCTGTG
AA
AAGACCTACAAGCCAGCTGAGGCAGCGGAGCCAGCCACCACAGCCGCCCCGTCGCTTCCCGCAGCACC
C
GCGCCTTCCACTGTCACCCCTGCTGAACAGGCCGACAAGCCCTACAGCTGCCCCATCTGCCAAAAGCCC
TTC
AAGCACCTGTCGGAGCTCTCTCGGCATGAGCGGATCCACACCGGTGAGAAGCCCTACAAGTGCACGC
TG
TGTGACAAAAGCTTCAGCCAGTCGTCGCACCTGGTGCACCACAAGCGCACGCACAGCTCCGAGCGGCC
C
TACAAGTGCGCAGTCTGCGAGAAGACCTTCAAGCACCGCTCTCACCTGGTGCGCCACATGTACGCGCAC
TCG
GGCGAGCACCACCTGTTCCGCTGCAACGTGTGCGAGTTGCATTTCAAGGAGTCGTCGGAGCTGCTGC
AG
CACCCGTGCACGCCAAGTGGGGAGCGGCCCTTCCGCTGCGGCGAGTGCCAGAAGGCCTTCAAGCGGCC
C
TCGGACCTGCGGCAGCATGAGCGCACACACAGCGCCGAGCGGCCCTTCAAGTGCGACCTGTGCCCCATG
GGC
TTCAAGCAGCAGTACGCACTGATGCGCCACCGGCGCACACACAAGACCGAGGAGCCCTTCAAATGCG
GC
CTATGTGAGAAGGGCTTTGGGCAGCCCAGCCACCTGCTCTACCACCAGCACGTGCACACCCTCGAGAC
T
CTCTTCAAGTGCCCCGTGTGCCAGAAAGGCTTTGACCAATCTGCCGAGCTGCTGCGGCACAAGTGCCTG
CCC
GGCGCGGCCGAGCGGCCCTTCAAGTGCCCTGTGTGCAACAAGGCCTACAAGCGCGCGTCGGCCCTGC
AG
AAGCACCAGCTGGCCCACTGTGCGGCGGCAGAGAAGCCCCTGCGCTGCACGCTTTGCGAACGCCGCTT
C
TTCTCCTCTTCCGAGTTCGTGCAGCACCGCTGCGATCCGGCCCGCGAGAAGCCACTCAAGTGCCCAGAC
TGC
GAGAAACGCTTCAAGTACGCGTCAGACCTGCAGCGGCACCGGCGGGTACACACAGGCGAGAAGCCCT
AC
AAGTGCCCCAACTGCGACAAGGCCTTCAAGCAGCGGGAGCATCTCAACAAGCACCAGGGCGTGCACGC
C
CGCGAGCAGCAGTTCAAGTGTGTATGGTGCGGGGAGCGCTTCCTAGACGTGGCCTTGTTGCAGGAGCAC
AGC
GCGCAGCACAGTGCCGCCGCCGCGGCAGCGGAGGGCGCCTACCAGGTAGCCGCCTGCCTGCCCTGA


Translation (582 aa):
MSESWQQPPQTQPQQPQPPQPQHHAEPPPALAEHTLPPGTAENPLGCAVYGILLQPDPGLQPPQHAPLQA
A
GEPGPKCGVCGHDLAHLSSPHEHQCLAGHDRSFQCTQCLKIFHQATDLLEHQCVQAEQKPFVCGVCKMG
F
SLLTSLAQHHSSHSGLVKCSICEKTYKPAEAAEPATTAAPSLPAAPAPSTVTPAEQADKPYSCPICQKP
F
KHLSELSRHERIHTGEKPYKCTLCDKSFSQSSHLVHHKRTHSSERPYKCAVCEKTFKHRSHLVRHMYAH
S
GEHHLFRCNVCELHFKESSELLQHPCTPSGERPFRCGECQKAFKRPSDLRQHERTHSAERPFKCDLCPM
G
FKQQYALMRHRRTHKTEEPFKCGLCEKGFGQPSHLLYHQHVHTLETLFKCPVCQKGFDQSAELLRHKCL
P
GAAERPFKCPVCNKAYKRASALQKHQLAHCAAAEKPLRCTLCERRFFSSSEFVQHRCDPAREKPLKCPD
C
EKRFKYASDLQRHRRVHTGEKPYKCPNCDKAFKQREHLNKHQGVHAREQQFKCVWCGERFLDVALLQEH
S
AQHSAAAAAAEGAYQVAACLP




Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
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