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Report for CCDS10440.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10440.2 Public Homo sapiens 16 CRAMP1 24 110 108 CCDS HistoryNCBI Gene:57585Re-query CCDS DB by CCDS ID:10440.2See the combined annotation on chromosome 16 in Sequence Viewer

Public Note for CCDS 10440.1
The coding region has been updated to extend the N-terminus to one that is more supported by available conservation and homologous transcript data.

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 10440.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000293925.9 ENSP00000293925.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000293925.9Link to Ensembl Protein Viewer:ENSP00000293925.5Re-query CCDS DB by Nucleotide ID:ENST00000293925Re-query CCDS DB by Protein ID:ENSP00000293925
Original member Current member EBI ENST00000397412.8 ENSP00000380559.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000397412.8Link to Ensembl Protein Viewer:ENSP00000380559.2Re-query CCDS DB by Nucleotide ID:ENST00000397412Re-query CCDS DB by Protein ID:ENSP00000380559
Original member Current member NCBI NM_020825.4 NP_065876.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020825.4Link to Protein Sequence:NP_065876.3Re-query CCDS DB by Nucleotide ID:NM_020825Re-query CCDS DB by Protein ID:NP_065876Link to BLAST:NP_065876.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_065876.3 1269 Q96RY5 1269 100% 0 0

Chromosomal Locations for CCDS 10440.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 1614640 1614985 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1625973 1626166 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1632212 1632365 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1637824 1637907 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1641139 1641187 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1652496 1652581 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1653033 1653156 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1655219 1655300 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1655877 1656992 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1659886 1660063 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1662490 1662671 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1662761 1662835 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1665057 1665138 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1666073 1666177 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1666422 1666600 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1667335 1667400 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1667962 1668193 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1669001 1669165 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1670664 1670809 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1673881 1674045 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3810 nt):
ATGACAGTGAAGTTGGGCGACGGCGGCAGCGGGGAGGACGGGCTCAAGAAGCTGGGCAAGCGGGCGGCCG
ATGAGGAGTCCCTGGAAGGAGAAGGGGCCGGCGGCGCAGACGCGGCCGAGGAGAGCAGCGGCACAAAGAG
GGACGAGAAGACCCCCCGGGCCGGCGCCGACGGCCCCCCCGCGCCCCCCGGCGCGCCGCAGGCGCCGTCC
CCGCCGCAGGGCAGCCCCCAGGACCAGCACCACTTCCTCCGGTCCAGCGTGCGGCCGCAGAGCAAGAGGC
CCAGGAAGGATCCTCCGAGCGCTGTGGGGAGCGGCAACGCCGGTGGCTCGGGGCCCCGCGGAAAAGGAGC
TGAAGGTGGTGGATCATCGTCTGGAAATGTGTCTGGGGTTGCCCCTGCTGCCCCTGCAGGGGGCTCGCGC
TCCTCCTCCCGGAACTTAGGGTCTTCTGGTGGCGAGAAGGAAGAAGGCAAAAAGGTCCGGCGGCAGTGGG
AGTCGTGGAGCACAGAGGACAAGAACACCTTCTTCGAGGGGCTGTACGAGCATGGGAAAGACTTTGAAGC
GATTCAGAACAACATTGCGCTGAAGTACAAGAAGAAAGGCAAGCCAGCAAGCATGGTGAAGAACAAGGAG
CAGGTCCGCCACTTCTACTACCGCACCTGGCACAAGATCACCAAGTACATCGACTTTGATCATGTGTTCT
CTCGAGGCCTGAAGAAGTCATCCCAGGAACTGTATGGCCTGATCTGCTATGGCGAGCTGCGCAAGAAGAT
TGGGGGCTGTATGGATGACAAGAATGCAACAAAGCTGAATGAACTCATTCAGGTTGGGGCCACCACTGTA
CGTTACAAAGGGCGGAACCTGCGGATCAAAGCGCCCATGTGCCGGGCCCTGAAGAAGCTGTGCGATCCAG
ATGGCTTGAGTGATGAAGAGGACCAGAAGCCAGTGCGCCTGCCTCTGAAAGTCCCTATAGAGCTACAGCC
GCGGAACAACCACGCCTGGGCCCGTGTGCAGAGCCTTGCCCAGAACCCACGCCTCAGGATGATCGTGGAG
CTACATCGAAAGGTCTCCAGCCTCATCGAATTCTTGAAGCAGAAGTGGGCGCTCCATGAGGTGCGAGTTC
GGAAGACACTCGAGGAGCGGCAGCTGCAGGACTCATGCTCCGCACCGATGCAGGAGAAGGTGACACTGCA
CTTGTTCCCAGGCGAGAACTGTACACTGACACCGCTGCCGGGCGTGGCTCGCGTGGTGCACTCCAAGGCC
TTCTGCACAGTGCACTGGCAGGAGGGCGGCCGGTGCAAGCAGAGTGCCAAGGACGCCCACGTGCTGCCCC
CAGCCCAGATCCTGGGCATCCAGAGTGGGCAGGGCACGGCCCGGGGCCAGGTGAAATGCCCGCGGAGCGG
AGCTGAGGGCAAGGGTGTGGGGCGGCCCCCTCCTGCGGCTGACGCCTTGCAGAGCTCCGGAGAGAGTTCC
CCCGAAAGCGCCCCCGGGGAGGGGGCTGCCCTAAGCTTGAGCAGCCCGGACGCTCCTGACAGGCCTCCTC
CCAGGCACCAGGACACTGGGCCATGTCTTGAGAAGACCCCTGCAGAAGGCAGGGACAGTCCCACCCGGGA
GCCAGGGGCCTTGCCGTGTGCCTGTGGCCAGCTCCCAGACCTGGAGGACGAGCTCTCGCTTCTAGACCCC
TTGCCCCGCTACCTAAAGTCCTGTCAGGACCTCATTGTCCCCGAGCAGTGCCGCTGTGCGGACACACGGC
CTGGGAGCGAGCAGCCCCCTCTGGGCGGGGCGGCCTCCCCAGAGGTGCTGGCTCCTGTCAGCAAGGAGGC
TGCTGACCTTGCTCCCACTGGCCCATCCCCGAGGCCCGGCCCCGGGCTCCTGCTGGATGTTTGCACTAAA
GACTTGGCAGATGCACCTGCGGAGGAGCTCCAGGAGAAGGGGAGCCCCGCGGGGCCTCCGCCGTCTCAGG
GACAGCCTGCCGCCAGGCCCCCGAAGGAGGTCCCCGCCAGCCGGCTGGCTCAGCAGCTCCGTGAGGAGGG
CTGGAACCTGCAGACCTCCGAAAGCCTCACGCTGGCCGAAGTCTACCTCATGATGGGCAAGCCCAGCAAG
CTGCAGCTGGAGTACGACTGGCTGGGGCCCGGCCGCCAGGACCCCCGCCCCGGCTCCCTACCCACCGCCC
TCCACAAGCAGCGCCTCCTCAGCTGCCTCCTGAAGCTCATTTCCACCGAGGTCAACCCCAAGCTGGCTCT
GGAAGCAAACACCATCTCTACAGCCTCAGTAAGGCCCGCCCAGGAGGAGCAGTCGATGACGCCCCCAGGG
AAGGTGGTGACCGTCAGCTCTCGCAGCCCCCGCTGCCCTCGGAACCAGGCCTCCCTCCGCAGCAGCAAGA
CCTTCCCGCCCAGCTCTGCACCCTGCTCCTCAGGTTTGAGAAACCCTCCAAGACCCCTCTTGGTGCCTGG
TCCCTCCAGCACAGGAAGCAATGACTCAGATGGAGGCCTTTTTGCTGTCCCGACAACCTTGCCACCCAAC
AGCCGACACGGGAAGCTCTTCTCTCCCAGTAAAGAAGCAGAGCTGACTTTCCGCCAGCATCTGAACTCCA
TCAGTATGCAGTCGGATTTCTTCCTGCCAAAGCCCCGGAAGCTGCGGAACCGGCACCTGCGGAAGCCACT
GGTGGTCCAGAGAACACTGCTCCCTAGACCATCGGAAAACCAGTCCCACAACGTTTGTTCCTTCTCCATC
CTGTCTAACTCTTCCGTAACTGGGAGAGGTTCGTTCCGGCCCATCCAGTCTTCTCTGACCAAAGCAGCTC
TGTCTCGGCCGATCGTGCCCAAGGTCCTTCCACCCCAGGCCACGAGTCACCTGGCCAGTGCTATCGACTT
AGCAGCTACAAGTGCCGGCATCCTTTCCGGGAACCCCCTCCCTGCCTTGGACACCGAGGGCTTGTCTGGC
ATCTCTCCACTGTCTTCAGACGAGGTGACGGGTGCCATCTCGGGGCAGGACTCTACTGGAACTCACCAGG
ATGGAGACACCCTCCCCACCGTGGGGGGCTCCGACCCATTTGTCAGCATCCCTTCGAGGCCTGAGCAGGA
GCCAGTGGCAGACAGTTTCCAGGGCTCATCTGTTCTCTCCTTATCTGAGCTGCCCAAGGCCCCTCTCCAG
AATGGCCTCTCCATACCGCTGTCCTCGTCAGAGAGCTCCAGCACCCGGCTGTCTCCACCAGACGTCTCTG
CTCTGCTCGACATCTCCCTGCCCGGCCCACCTGAGGATGCGCTGTCACAGGGCGAGCCTGCCACACACAT
TAGCGACTCCATCATTGAGATCGCCATCAGCTCCGGTCAGTACGGTGAAGGAGTCCCTCTTTCTCCAGCA
AAACTGAATGGCAGTGACAGTTCCAAGAGCCTTCCCTCCCCGTCCAGCAGCCCCCAGCCACACTGGATCG
CCTCTCCCACCCACGACCCCCAGTGGTACCCCAGTGACTCCACCGACTCCTCGCTCAGCAGCCTGTTTGC
AAGCTTCATCTCCCCAGAGAAGAGCCGGAAGATGTTGCCGACTCCCATTGGGACCAACAGTGGCACTTCC
TTGCTTGGCCCCAGCTTGTTGGATGGAAACTCGCGGGACTCATTTGTGTCCAGGTCCCTGGCTGACGTTG
CAGAGGTTGTGGATTCCCAGCTGGTGTGCATGATGAACGAAAACAGCATTGATTACATTTCTCGGTTCAA
TGACCTGGCCCAAGAGCTGTCCATCGCTGAGCCTGGCCGCCGAGAAGCTCTGTTTGATGGTGGTGGAGGC
GGCCCCGCTGTCAGTGACCTGTCCCAGTGA

Translation (1269 aa):
MTVKLGDGGSGEDGLKKLGKRAADEESLEGEGAGGADAAEESSGTKRDEKTPRAGADGPPAPPGAPQAPS
PPQGSPQDQHHFLRSSVRPQSKRPRKDPPSAVGSGNAGGSGPRGKGAEGGGSSSGNVSGVAPAAPAGGSR
SSSRNLGSSGGEKEEGKKVRRQWESWSTEDKNTFFEGLYEHGKDFEAIQNNIALKYKKKGKPASMVKNKE
QVRHFYYRTWHKITKYIDFDHVFSRGLKKSSQELYGLICYGELRKKIGGCMDDKNATKLNELIQVGATTV
RYKGRNLRIKAPMCRALKKLCDPDGLSDEEDQKPVRLPLKVPIELQPRNNHAWARVQSLAQNPRLRMIVE
LHRKVSSLIEFLKQKWALHEVRVRKTLEERQLQDSCSAPMQEKVTLHLFPGENCTLTPLPGVARVVHSKA
FCTVHWQEGGRCKQSAKDAHVLPPAQILGIQSGQGTARGQVKCPRSGAEGKGVGRPPPAADALQSSGESS
PESAPGEGAALSLSSPDAPDRPPPRHQDTGPCLEKTPAEGRDSPTREPGALPCACGQLPDLEDELSLLDP
LPRYLKSCQDLIVPEQCRCADTRPGSEQPPLGGAASPEVLAPVSKEAADLAPTGPSPRPGPGLLLDVCTK
DLADAPAEELQEKGSPAGPPPSQGQPAARPPKEVPASRLAQQLREEGWNLQTSESLTLAEVYLMMGKPSK
LQLEYDWLGPGRQDPRPGSLPTALHKQRLLSCLLKLISTEVNPKLALEANTISTASVRPAQEEQSMTPPG
KVVTVSSRSPRCPRNQASLRSSKTFPPSSAPCSSGLRNPPRPLLVPGPSSTGSNDSDGGLFAVPTTLPPN
SRHGKLFSPSKEAELTFRQHLNSISMQSDFFLPKPRKLRNRHLRKPLVVQRTLLPRPSENQSHNVCSFSI
LSNSSVTGRGSFRPIQSSLTKAALSRPIVPKVLPPQATSHLASAIDLAATSAGILSGNPLPALDTEGLSG
ISPLSSDEVTGAISGQDSTGTHQDGDTLPTVGGSDPFVSIPSRPEQEPVADSFQGSSVLSLSELPKAPLQ
NGLSIPLSSSESSSTRLSPPDVSALLDISLPGPPEDALSQGEPATHISDSIIEIAISSGQYGEGVPLSPA
KLNGSDSSKSLPSPSSSPQPHWIASPTHDPQWYPSDSTDSSLSSLFASFISPEKSRKMLPTPIGTNSGTS
LLGPSLLDGNSRDSFVSRSLADVAEVVDSQLVCMMNENSIDYISRFNDLAQELSIAEPGRREALFDGGGG
GPAVSDLSQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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