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Report for CCDS10259.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
10259.1 |
Public |
Homo sapiens |
15 |
ISLR2 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:57611](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:10259.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 15 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 10259.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000361742.7 |
ENSP00000355402.3 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000361742.7](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000355402.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000361742](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000355402](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000435464.5 |
ENSP00000411443.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000435464.5](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000411443.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000435464](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000411443](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000453268.3 |
ENSP00000411834.2 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000453268.3](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000411834.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000453268](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000411834](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000565159.5 |
ENSP00000455531.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000565159.5](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000455531.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000565159](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000455531](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000565540.1 |
ENSP00000458080.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000565540.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000458080.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000565540](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000458080](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001130136.1 |
NP_001123608.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001130136.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001123608.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001130136](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001123608](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001123608.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001130137.1 |
NP_001123609.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001130137.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001123609.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001130137](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001123609](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001123609.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001130138.2 |
NP_001123610.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001130138.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001123610.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001130138](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001123610](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001123610.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_020851.3 |
NP_065902.1 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_020851.3](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_065902.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_020851](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_065902](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_065902.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 10259.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (2238 nt): ATGTTCCCCCTTCGGGCCCTGTGGTTGGTCTGGGCGCTTCTAGGAGTGGCCGGATCATGCCCGGAGCCGT GCGCCTGCGTGGACAAGTACGCTCACCAGTTCGCGGACTGCGCTTACAAAGAGTTGCGTGAGGTGCCGGA AGGACTGCCTGCCAACGTGACGACGCTTAGTCTGTCCGCGAACAAGATCACTGTGCTGCGGCGCGGGGCC TTCGCCGACGTCACACAGGTCACGTCGCTGTGGCTGGCGCACAATGAGGTGCGCACCGTGGAGCCAGGCG CACTGGCCGTGCTGAGTCAGCTCAAGAACCTCGATCTGAGCCACAACTTCATATCCAGCTTTCCGTGGAG CGACCTGCGCAACCTGAGCGCGCTGCAGCTGCTCAAAATGAACCACAACCGCCTGGGCTCTCTGCCCCGG GACGCACTCGGTGCGCTACCCGACCTGCGTTCCCTGCGCATCAACAACAACCGGCTGCGTACGCTGGCGC CTGGCACCTTCGACGCGCTTAGCGCGCTGTCACACTTGCAACTCTATCACAATCCCTTCCACTGCGGCTG CGGCCTTGTGTGGCTGCAGGCCTGGGCCGCGAGCACCCGGGTGTCCTTACCCGAGCCCGACTCCATTGCT TGTGCCTCGCCTCCCGCGCTGCAGGGGGTGCCGGTGTACCGCCTGCCCGCCCTGCCCTGTGCACCGCCCA GCGTGCATCTGAGTGCCGAGCCACCGCTTGAAGCACCCGGCACCCCACTGCGCGCAGGACTGGCGTTCGT GTTACACTGCATCGCCGACGGCCACCCTACGCCTCGCCTGCAATGGCAACTTCAGATCCCCGGTGGCACC GTAGTCTTAGAGCCACCGGTTCTGAGCGGGGAGGACGACGGGGTTGGGGCGGAGGAAGGAGAGGGAGAAG GAGATGGGGATTTGCTGACGCAGACCCAAGCCCAAACGCCGACTCCAGCACCCGCTTGGCCGGCGCCCCC AGCCACACCGCGCTTCCTGGCCCTCGCAAATGGCTCCCTGTTGGTGCCCCTCCTGAGTGCCAAGGAGGCG GGCGTCTACACTTGCCGTGCACACAATGAGCTGGGCGCCAACTCTACGTCAATACGCGTGGCGGTGGCAG CAACCGGGCCCCCAAAACACGCGCCTGGCGCCGGGGGAGAACCCGACGGACAGGCCCCGACCTCTGAGCG CAAGTCCACAGCCAAGGGCCGGGGCAACAGCGTCCTGCCTTCCAAACCCGAGGGCAAAATCAAAGGCCAA GGCCTGGCCAAGGTCAGCATTCTCGGGGAGACCGAGACGGAGCCGGAGGAGGACACAAGTGAGGGAGAGG AGGCCGAAGACCAGATCCTCGCGGACCCGGCGGAGGAGCAGCGCTGTGGCAACGGGGACCCCTCTCGGTA CGTTTCTAACCACGCGTTCAACCAGAGCGCAGAGCTCAAGCCGCACGTCTTCGAGCTGGGCGTCATCGCG CTGGATGTGGCGGAGCGCGAGGCGCGGGTGCAGCTGACTCCGCTGGCTGCGCGCTGGGGCCCTGGGCCCG GCGGGGCTGGCGGAGCCCCGCGACCCGGGCGGCGACCCCTGCGCCTACTCTATCTGTGTCCAGCGGGGGG CGGCGCGGCAGTGCAGTGGTCCCGCGTAGAGGAAGGCGTCAACGCCTACTGGTTCCGCGGCCTGCGGCCG GGTACCAACTACTCCGTGTGCCTGGCGCTGGCGGGCGAAGCCTGCCACGTGCAAGTGGTGTTTTCCACCA AGAAGGAGCTCCCATCGCTGCTGGTCATAGTGGCAGTGAGCGTATTCCTCCTGGTGCTGGCCACAGTGCC CCTTCTGGGCGCCGCCTGCTGCCATCTGCTGGCTAAACACCCGGGCAAGCCCTACCGTCTGATCCTGCGG CCTCAGGCCCCTGACCCTATGGAGAAGCGCATCGCCGCAGACTTCGACCCGCGTGCTTCGTACCTCGAGT CCGAGAAAAGCTACCCGGCAGGCGGCGAGGCGGGCGGCGAGGAGCCAGAGGACGTGCAGGGGGAGGGCCT TGATGAAGACGCGGAGCAGGGAGACCCAAGTGGGGACCTGCAGAGAGAGGAGAGCCTGGCGGCCTGCTCA CTGGTGGAGTCCCAGTCCAAGGCCAACCAAGAGGAGTTCGAGGCGGGCTCTGAGTACAGCGATCGGCTGC CCCTGGGCGCCGAGGCGGTCAACATCGCCCAGGAGATTAATGGCAACTACAGGCAGACGGCAGGCTGA
Translation (745 aa): MFPLRALWLVWALLGVAGSCPEPCACVDKYAHQFADCAYKELREVPEGLPANVTTLSLSANKITVLRRGA FADVTQVTSLWLAHNEVRTVEPGALAVLSQLKNLDLSHNFISSFPWSDLRNLSALQLLKMNHNRLGSLPR DALGALPDLRSLRINNNRLRTLAPGTFDALSALSHLQLYHNPFHCGCGLVWLQAWAASTRVSLPEPDSIA CASPPALQGVPVYRLPALPCAPPSVHLSAEPPLEAPGTPLRAGLAFVLHCIADGHPTPRLQWQLQIPGGT VVLEPPVLSGEDDGVGAEEGEGEGDGDLLTQTQAQTPTPAPAWPAPPATPRFLALANGSLLVPLLSAKEA GVYTCRAHNELGANSTSIRVAVAATGPPKHAPGAGGEPDGQAPTSERKSTAKGRGNSVLPSKPEGKIKGQ GLAKVSILGETETEPEEDTSEGEEAEDQILADPAEEQRCGNGDPSRYVSNHAFNQSAELKPHVFELGVIA LDVAEREARVQLTPLAARWGPGPGGAGGAPRPGRRPLRLLYLCPAGGGAAVQWSRVEEGVNAYWFRGLRP GTNYSVCLALAGEACHVQVVFSTKKELPSLLVIVAVSVFLLVLATVPLLGAACCHLLAKHPGKPYRLILR PQAPDPMEKRIAADFDPRASYLESEKSYPAGGEAGGEEPEDVQGEGLDEDAEQGDPSGDLQREESLAACS LVESQSKANQEEFEAGSEYSDRLPLGAEAVNIAQEINGNYRQTAG
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