NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS31552.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31552.1 Public Homo sapiens 11 OR5B21 24 110 108 CCDS HistoryNCBI Gene:219968Re-query CCDS DB by CCDS ID:31552.1Re-query CCDS DB by GeneID:219968See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31552.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000360374.3 ENSP00000353537.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000360374.3Link to Ensembl Protein Viewer:ENSP00000353537.2Re-query CCDS DB by Nucleotide ID:ENST00000360374Re-query CCDS DB by Protein ID:ENSP00000353537
Original member Current member NCBI NM_001005218.3 NP_001005218.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001005218.3Link to Protein Sequence:NP_001005218.1Re-query CCDS DB by Nucleotide ID:NM_001005218Re-query CCDS DB by Protein ID:NP_001005218Link to BLAST:NP_001005218.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001005218.1 309 A6NL26 309 100% 0 0

Chromosomal Locations for CCDS 31552.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 58507176 58508105 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (930 nt):
ATGGAGAATAGCACAGAAGTGACAGAGTTTATCCTCTTGGGATTAACAGATGACCCCAATCTTCAGATAC
CCCTCCTCCTGGCATTTTTATTCATCTACCTCATCACCCTGCTTGGGAATGGGGGAATGATGGTGATCAT
CCACTCAGACTCCCATCTCCACACTCCAATGTACTTTTTCCTCAGTAACCTCTCCCTTGTAGACTTGGGT
TACTCATCAGCTGTAGCCCCCAAAACGGTGGCTGCATTGCGGTCAGGGGACAAGGCCATCTCCTACGATG
GATGTGCAGCTCAGTTCTTCTTCTTTGTGGGGTTTGCCACTGTTGAGTGCTACCTCCTGGCCTCCATGGC
CTATGATCGCCATGCAGCGGTATGTAGGCCTCTTCATTACACCACCACCATGACAGCAGGTGTGTGTGCC
CTCCTTGCTACTGGTTCCTATGTCTCTGGCTTCCTCAATGCCTCTATCCATGCAGCAGGCACCTTCAGAC
TCTCCTTCTGTGGTTCTAATGAGATTAATCATTTCTTCTGTGACATTCCCCCACTCCTGGCTCTCTCATG
CTCTGACACACGCATCAGCAAGTTGGTGGTCTTTGTGGCAGGCTTCAACGTCTTTTTCACCCTCCTGGTC
ATCCTTATTTCTTACTTCTTCATATGCATCACCATTCAGAGGATGCATTCTGCTGAAGGGCAGAAGAAAG
TCTTCTCCACCTGTGCTTCCCATCTCACTGCTTTGTCCATCTTCTATGGCACAATCATCTTCATGTACTT
ACAGCCCAACTCCAGCCAGTCCGTGGACACAGACAAAATAGCCTCTGTGTTTTACACAGTGGTGATTCCC
ATGCTGAATCCCTTGATATACAGCCTTAGGAACAAAGAAGTGAAAAGTGCTCTCTGGAAAATACTCAACA
AACTTTACCCCCAATATTAA

Translation (309 aa):
MENSTEVTEFILLGLTDDPNLQIPLLLAFLFIYLITLLGNGGMMVIIHSDSHLHTPMYFFLSNLSLVDLG
YSSAVAPKTVAALRSGDKAISYDGCAAQFFFFVGFATVECYLLASMAYDRHAAVCRPLHYTTTMTAGVCA
LLATGSYVSGFLNASIHAAGTFRLSFCGSNEINHFFCDIPPLLALSCSDTRISKLVVFVAGFNVFFTLLV
ILISYFFICITIQRMHSAEGQKKVFSTCASHLTALSIFYGTIIFMYLQPNSSQSVDTDKIASVFYTVVIP
MLNPLIYSLRNKEVKSALWKILNKLYPQY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH