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Report for CCDS6847.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6847.1 Public Homo sapiens 9 ZBTB26 24 110 108 CCDS HistoryNCBI Gene:57684Re-query CCDS DB by CCDS ID:6847.1See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6847.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000373654.1 ENSP00000362758.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000373654.1Link to Ensembl Protein Viewer:ENSP00000362758.1Re-query CCDS DB by Nucleotide ID:ENST00000373654Re-query CCDS DB by Protein ID:ENSP00000362758
Original member Current member EBI ENST00000373656.4 ENSP00000362760.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000373656.4Link to Ensembl Protein Viewer:ENSP00000362760.3Re-query CCDS DB by Nucleotide ID:ENST00000373656Re-query CCDS DB by Protein ID:ENSP00000362760
Original member Current member NCBI NM_001304363.2 NP_001291292.1 Accepted alive Link to Nucleotide Sequence:NM_001304363.2Link to Protein Sequence:NP_001291292.1Re-query CCDS DB by Nucleotide ID:NM_001304363Re-query CCDS DB by Protein ID:NP_001291292Link to BLAST:NP_001291292.1
Original member Current member NCBI NM_001304364.2 NP_001291293.1 Accepted alive Link to Nucleotide Sequence:NM_001304364.2Link to Protein Sequence:NP_001291293.1Re-query CCDS DB by Nucleotide ID:NM_001304364Re-query CCDS DB by Protein ID:NP_001291293Link to BLAST:NP_001291293.1
Original member Current member NCBI NM_020924.4 NP_065975.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020924.4Link to Protein Sequence:NP_065975.1Re-query CCDS DB by Nucleotide ID:NM_020924Re-query CCDS DB by Protein ID:NP_065975Link to BLAST:NP_065975.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001291292.1 441 Q9HCK0 441 100% 0 0
NP_001291293.1 441 Q9HCK0 441 100% 0 0
NP_065975.1 441 Q9HCK0 441 100% 0 0

Chromosomal Locations for CCDS 6847.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 122918609 122919934 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1326 nt):
ATGTCTGAAAGATCAGATCTCCTTCACTTCAAGTTTGAAAATTATGGAGATTCAATGTTACAAAAAATGA
ACAAATTAAGAGAAGAGAATAAATTTTGTGATGTTACAGTTCTCATAGATGATATTGAGGTACAGGGACA
TAAAATTGTGTTTGCTGCAGGTTCCCCCTTCTTAAGAGACCAATTTTTACTGAATGATTCCAGAGAGGTG
AAAATCTCCATATTACAGAGTTCCGAAGTGGGGAGACAATTGCTCTTATCCTGTTATAGTGGTGTGCTGG
AATTCCCTGAGATGGAACTGGTAAATTACTTGACTGCTGCAAGTTTTCTTCAGATGAGCCACATTGTAGA
ACGGTGCACACAGGCCCTGTGGAAGTTTATAAAGCCAAAACAACCAATGGATAGTAAAGAGGGATGTGAA
CCACAGAGTGCTTCTCCCCAGTCAAAAGAACAGCAGGGAGATGCCAGAGGCTCCCCAAAGCAGGACTCAC
CTTGTATTCATCCATCTGAAGACAGTATGGATATGGAGGACAGTGATATTCAGATTGTTAAGGTAGAATC
TATTGGGGATGTATCAGAGGTTAGAAGTAAAAAAGATCAGAACCAGTTTATTTCTTCTGAACCCACTGCT
TTACATTCATCAGAGCCCCAGCACTCCCTGATAAATTCAACTGTGGAAAACAGAGTAAGTGAAATAGAAC
AAAACCATCTCCACAATTATGCCCTTTCTTATACAGGCAGTGATAACATCATCATGGCCTCAAAAGATGT
CTTTGGCCCTAATATTCGAGGTGTAGACAAAGGCCTACAGTGGCATCACCAGTGCCCAAAGTGTACCAGG
GTGTTTCGTCACCTGGAGAACTACGCCAACCATTTAAAAATGCACAAACTCTTTATGTGTCTACTCTGCG
GCAAGACTTTCACTCAGAAAGGCAACCTTCATCGACACATGCGTGTGCATGCCGGAATTAAACCTTTCCA
GTGTAAAATCTGTGGGAAAACCTTTTCTCAGAAGTGTTCCTTACAGGATCATCTTAACCTTCACAGTGGA
GATAAGCCCCATAAATGTAACTATTGTGATATGGTTTTTGCACATAAACCAGTTTTGAGGAAACACCTTA
AACAGCTGCATGGCAAAAACAGCTTTGATAATGCCAATGAGAGAAATGTACAAGACCTCACAGTGGATTT
TGATTCTTTTGCATGTACAACAGTCACAGACTCTAAAGGGTGTCAGCCACAACCCGATGCAACACAGGTC
CTGGATGCAGGTAAACTGGCCCAAGCTGTCCTGAACTTAAGAAATGATAGTACTTGTGTGAATTGA

Translation (441 aa):
MSERSDLLHFKFENYGDSMLQKMNKLREENKFCDVTVLIDDIEVQGHKIVFAAGSPFLRDQFLLNDSREV
KISILQSSEVGRQLLLSCYSGVLEFPEMELVNYLTAASFLQMSHIVERCTQALWKFIKPKQPMDSKEGCE
PQSASPQSKEQQGDARGSPKQDSPCIHPSEDSMDMEDSDIQIVKVESIGDVSEVRSKKDQNQFISSEPTA
LHSSEPQHSLINSTVENRVSEIEQNHLHNYALSYTGSDNIIMASKDVFGPNIRGVDKGLQWHHQCPKCTR
VFRHLENYANHLKMHKLFMCLLCGKTFTQKGNLHRHMRVHAGIKPFQCKICGKTFSQKCSLQDHLNLHSG
DKPHKCNYCDMVFAHKPVLRKHLKQLHGKNSFDNANERNVQDLTVDFDSFACTTVTDSKGCQPQPDATQV
LDAGKLAQAVLNLRNDSTCVN


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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