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Report for CCDS28629.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
28629.1 Public Mus musculus 17 Angptl4 23 108 98 CCDS HistoryNCBI Gene:57875Re-query CCDS DB by CCDS ID:28629.1See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 28629.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000002360.16 ENSMUSP00000002360.9 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000002360.16Link to Ensembl Protein Viewer:ENSMUSP00000002360.9Re-query CCDS DB by Nucleotide ID:ENSMUST00000002360Re-query CCDS DB by Protein ID:ENSMUSP00000002360
Original member Current member NCBI NM_020581.2 NP_065606.2 Accepted alive Link to Nucleotide Sequence:NM_020581.2Link to Protein Sequence:NP_065606.2Re-query CCDS DB by Nucleotide ID:NM_020581Re-query CCDS DB by Protein ID:NP_065606Link to BLAST:NP_065606.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_065606.2 410 Q9Z1P8 410 100% 0 0

Chromosomal Locations for CCDS 28629.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 33775387 33775568 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 33776950 33777231 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 33777320 33777415 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 33778372 33778485 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 33780530 33780647 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 33780783 33780893 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 33781063 33781392 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1233 nt):
ATGCGCTGCGCTCCGACAGCAGGCGCTGCCCTGGTGCTATGCGCGGCTACTGCGGGGCTTTTGAGCGCGC
AAGGGCGCCCTGCACAGCCAGAGCCACCGCGCTTTGCATCCTGGGACGAGATGAACTTGCTGGCTCACGG
GCTGCTACAGCTCGGCCATGGGCTGCGCGAACACGTGGAGCGCACCCGTGGGCAGCTGGGCGCGCTGGAG
CGCCGCATGGCTGCCTGTGGTAACGCTTGTCAGGGGCCCAAGGGAAAAGATGCACCCTTCAAAGACTCCG
AGGATAGAGTCCCTGAAGGCCAGACTCCTGAGACTCTGCAGAGTTTGCAGACTCAGCTCAAGGCTCAAAA
CAGCAAGATCCAGCAATTGTTCCAGAAGGTGGCCCAGCAGCAGAGATACCTATCAAAGCAGAATCTGAGA
ATACAGAATCTTCAGAGCCAGATAGACCTCTTGGCCCCCACGCACCTAGACAATGGAGTAGACAAGACTT
CGAGGGGAAAGAGGCTTCCCAAGATGACCCAGCTCATTGGCTTGACTCCCAACGCCACCCACTTACACAG
GCCGCCCCGGGACTGCCAGGAACTCTTCCAAGAAGGGGAGCGGCACAGTGGACTTTTCCAGATCCAGCCT
CTGGGGTCTCCACCATTTTTGGTCAACTGTGAGATGACTTCAGATGGAGGCTGGACAGTGATTCAGAGAC
GCCTGAACGGCTCTGTGGACTTCAACCAGTCCTGGGAAGCCTACAAGGATGGCTTCGGAGATCCCCAAGG
CGAGTTCTGGCTGGGCCTGGAAAAGATGCACAGCATCACAGGGAACCGAGGAAGCCAATTGGCTGTGCAG
CTCCAGGACTGGGATGGCAATGCCAAATTGCTCCAATTTCCCATCCATTTGGGGGGTGAGGACACAGCCT
ACAGCCTGCAGCTCACTGAGCCCACGGCCAATGAGCTGGGTGCCACCAATGTTTCCCCCAATGGCCTTTC
CCTGCCCTTCTCTACTTGGGACCAAGACCATGACCTCCGTGGGGACCTTAACTGTGCCAAGAGCCTCTCT
GGTGGCTGGTGGTTTGGTACCTGTAGCCATTCCAATCTCAATGGACAATACTTCCACTCTATCCCACGGC
AACGGCAGGAGCGTAAAAAGGGTATCTTCTGGAAAACATGGAAGGGCCGCTACTATCCTCTGCAGGCTAC
CACCCTGCTGATCCAGCCCATGGAGGCTACAGCAGCCTCTTAG

Translation (410 aa):
MRCAPTAGAALVLCAATAGLLSAQGRPAQPEPPRFASWDEMNLLAHGLLQLGHGLREHVERTRGQLGALE
RRMAACGNACQGPKGKDAPFKDSEDRVPEGQTPETLQSLQTQLKAQNSKIQQLFQKVAQQQRYLSKQNLR
IQNLQSQIDLLAPTHLDNGVDKTSRGKRLPKMTQLIGLTPNATHLHRPPRDCQELFQEGERHSGLFQIQP
LGSPPFLVNCEMTSDGGWTVIQRRLNGSVDFNQSWEAYKDGFGDPQGEFWLGLEKMHSITGNRGSQLAVQ
LQDWDGNAKLLQFPIHLGGEDTAYSLQLTEPTANELGATNVSPNGLSLPFSTWDQDHDLRGDLNCAKSLS
GGWWFGTCSHSNLNGQYFHSIPRQRQERKKGIFWKTWKGRYYPLQATTLLIQPMEATAAS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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