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Report for CCDS20733.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
20733.1 Public Mus musculus 7 Cdc42ep5 23 108 98 CCDS HistoryNCBI Gene:58804Re-query CCDS DB by CCDS ID:20733.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 20733.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000076831.6 ENSMUSP00000092508.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000076831.6Link to Ensembl Protein Viewer:ENSMUSP00000092508.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000076831Re-query CCDS DB by Protein ID:ENSMUSP00000092508
Original member Current member NCBI NM_021454.4 NP_067429.1 Accepted alive Link to Nucleotide Sequence:NM_021454.4Link to Protein Sequence:NP_067429.1Re-query CCDS DB by Nucleotide ID:NM_021454Re-query CCDS DB by Protein ID:NP_067429Link to BLAST:NP_067429.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_067429.1 150 Q9Z0X0 150 100% 0 0

Chromosomal Locations for CCDS 20733.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 4151335 4151787 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (453 nt):
ATGCCGGTAATGAAGCAGCTGGGCCCTGCACAACCCAAGAAGCGGCTGGATCGCGGAGCACTCTCGATCT
CAGCACCCCTCGGAGACTTCAGGCACACATTGCACGTGGGACGCGGTGGCGACGCCTTCGGGGACACCTC
ATTCCTGAGTCGCCACGGGGGCGGTCCGCCTCCCGAGCCTGGAGCCCCACCGGTTGTGGCCCCACATTCT
GTCGCTCCACCTGCAGCCCCACAGCCCCCTGTGGCTGTGCCTTCACCTGCGGACCCGCTGCTGTCTTTCC
ACCTGGACCTGGGCCCCTCTATGCTGGACGCGGTGTTAGGCGTCATGGACGCGGAGCGCAGCGAGACAAC
AGCCACCAAGCCCGATGGGGATGCCCACCCTAGAGTGCAGCACCCCAAGACCCGCTGCTGCTCAAATGCT
GACCTCCAGCTGGACGACGTCATCGGTCTGTAG

Translation (150 aa):
MPVMKQLGPAQPKKRLDRGALSISAPLGDFRHTLHVGRGGDAFGDTSFLSRHGGGPPPEPGAPPVVAPHS
VAPPAAPQPPVAVPSPADPLLSFHLDLGPSMLDAVLGVMDAERSETTATKPDGDAHPRVQHPKTRCCSNA
DLQLDDVIGL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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