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Report for CCDS12505.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
12505.1 |
Public |
Homo sapiens |
19 |
ZNF571 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:51276](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:12505.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:51276](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 19 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 12505.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000328550.6 |
ENSP00000333660.2 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000328550.6](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000333660.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000328550](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000333660](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000358744.3 |
ENSP00000351594.3 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000358744.3](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000351594.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000358744](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000351594](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000451802.7 |
ENSP00000392638.1 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000451802.7](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000392638.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000451802](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000392638](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000593133.5 |
ENSP00000467572.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000593133.5](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000467572.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000593133](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000467572](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001290314.2 |
NP_001277243.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001290314.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001277243.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001290314](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001277243](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001277243.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001321272.2 |
NP_001308201.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001321272.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001308201.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001321272](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001308201](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001308201.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_016536.5 |
NP_057620.3 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_016536.5](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_057620.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_016536](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_057620](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_057620.3](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 12505.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1830 nt): ATGCCCCACTTGTTGGTGACTTTCAGGGATGTGGCCATTGACTTCTCTCAGGAGGAATGGGAATGCCTGG ACCCTGCTCAGAGGGACTTGTACAGGGATGTGATGTTGGAGAACTACAGCAACCTGATCTCATTGGACTT GGAATCCAGTTGTGTGACCAAAAAGTTATCTCCAGAAAAGGAAATTTATGAAATGGAATCACTCCAGTGG GAGAATATGGGGAAACGTATCAACCATCACCTTCAATACAATGGTCTTGGAGACAATATGGAGTGCAAAG GCAACTTAGAGGGTCAAGAAGCAAGTCAGGAAGGGCTTTACATGTGTGTCAAAATTACCTGTGAAGAAAA GGCCACTGAAAGTCATTCAACCTCTTCTACTTTTCATCGGATAATTCCTACCAAGGAAAAATTGTACAAA TGTAAGGAATGCAGACAAGGTTTCAGCTACCTGTCATGCCTTATTCAACATGAGGAAAATCATAATATAG AAAAATGCTCTGAAGTTAAGAAACACAGGAATACCTTTAGCAAAAAGCCAAGCTATATTCAACATCAGAG AATTCAGACTGGTGAGAAACCTTATGAGTGTATGGAATGTGGAAAGGCCTTTGGTCGTACTTCTGATCTC ATTCAACATCAGAAAATTCATACTAATGAAAAACCTTATCAGTGTAACGCATGTGGGAAAGCTTTTATTC GTGGTTCACAGCTCACTGAACATCAGAGAGTTCATACAGGAGAGAAACCATATGAATGTAAGAAATGTGG AAAAGCCTTTAGTTATTGTTCACAATATACTCTTCATCAGAGAATTCATAGTGGTGAAAAACCCTATGAA TGTAAGGATTGTGGGAAGGCCTTTATTCTTGGCTCTCAACTTACTTACCATCAGAGAATTCATAGTGGTG AGAAACCTTATGAGTGTAAGGAATGTGGAAAGGCCTTTATTCTTGGTTCACACCTTACATACCATCAGAG AGTTCATACTGGTGAAAAGCCTTACATATGTAAAGAATGTGGGAAAGCCTTTTTATGTGCCTCCCAACTG AATGAACATCAGAGAATTCATACAGGAGAGAAACCCTATGAATGTAAAGAATGCGGGAAGACCTTTTTTC GTGGCTCACAACTTACTTACCACCTGAGAGTTCATTCAGGTGAGAGACCTTATAAATGCAAAGAATGTGG GAAAGCCTTTATTTCTAATTCTAATCTTATTCAACATCAAAGAATTCATACCGGAGAGAAGCCCTACAAA TGTAAGGAATGTGGAAAGGCCTTTATTTGTGGCAAACAACTTAGTGAACATCAGAGAATTCATACAGGTG AGAAACCCTTTGAATGTAAGGAATGTGGAAAGGCCTTTATTCGTGTTGCATATCTTACTCAACATGAGAA AATTCATGGTGAGAAACATTATGAATGTAAGGAATGTGGGAAGACCTTTGTACGTGCTACACAACTTACA TATCATCAAAGAATTCATACAGGTGAAAAGCCCTACAAATGTAAGGAATGTGACAAGGCCTTTATTTATG GCTCACAACTTAGTGAACATCAGAGAATTCACAGAGGTGAAAAACCTTATGAATGTAAACAGTGTGGGAA GGCTTTTATTCGTGGCTCACACCTTACTGAACATCTGAGAACTCATACTGGAGAGAAACCCTATGAATGT AAGGAATGTGGGAGGGCCTTTAGTCGTGGCTCAGAACTTACTCTGCATCAAAGGATCCATACTGGTGAGA AACCCTATACATGTGTCCAGTGTGGTAAAGACTTTAGATGTCCTTCACAACTTACTCAACATACAAGGCT TCATAATTGA
Translation (609 aa): MPHLLVTFRDVAIDFSQEEWECLDPAQRDLYRDVMLENYSNLISLDLESSCVTKKLSPEKEIYEMESLQW ENMGKRINHHLQYNGLGDNMECKGNLEGQEASQEGLYMCVKITCEEKATESHSTSSTFHRIIPTKEKLYK CKECRQGFSYLSCLIQHEENHNIEKCSEVKKHRNTFSKKPSYIQHQRIQTGEKPYECMECGKAFGRTSDL IQHQKIHTNEKPYQCNACGKAFIRGSQLTEHQRVHTGEKPYECKKCGKAFSYCSQYTLHQRIHSGEKPYE CKDCGKAFILGSQLTYHQRIHSGEKPYECKECGKAFILGSHLTYHQRVHTGEKPYICKECGKAFLCASQL NEHQRIHTGEKPYECKECGKTFFRGSQLTYHLRVHSGERPYKCKECGKAFISNSNLIQHQRIHTGEKPYK CKECGKAFICGKQLSEHQRIHTGEKPFECKECGKAFIRVAYLTQHEKIHGEKHYECKECGKTFVRATQLT YHQRIHTGEKPYKCKECDKAFIYGSQLSEHQRIHRGEKPYECKQCGKAFIRGSHLTEHLRTHTGEKPYEC KECGRAFSRGSELTLHQRIHTGEKPYTCVQCGKDFRCPSQLTQHTRLHN
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