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Report for CCDS71917.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
71917.1 Public Mus musculus 7 Dmac2 23 108 98 CCDS HistoryNCBI Gene:66349Re-query CCDS DB by CCDS ID:71917.1Re-query CCDS DB by GeneID:66349See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 16, NCBI annotation release 104, Ensembl annotation release 75

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 71917.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000077338.11 ENSMUSP00000076563.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000077338.11Link to Ensembl Protein Viewer:ENSMUSP00000076563.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000077338Re-query CCDS DB by Protein ID:ENSMUSP00000076563
Original member Current member NCBI NM_001290487.1 NP_001277416.1 Accepted alive Link to Nucleotide Sequence:NM_001290487.1Link to Protein Sequence:NP_001277416.1Re-query CCDS DB by Nucleotide ID:NM_001290487Re-query CCDS DB by Protein ID:NP_001277416Link to BLAST:NP_001277416.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001277416.1 258 Q9D7K5 258 100% 0 0

Chromosomal Locations for CCDS 71917.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 25619443 25619460 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 25620896 25621092 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 25622344 25622424 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 25623799 25623938 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 25624027 25624189 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 25624715 25624892 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (777 nt):
ATGGCGGCGCCCAGAGCGGTCCTGCACCTGGGCGCCCGAGAATGGAATGGCAGAGCCAGGCGCATCCATG
GCATGAGTGAGTTGGTGACCCCGGACAGCAGTCGGGAGAAGAAAAGAACGCTGTTGCAGTTCCTCTCAGA
TCATTTCCAGGACATCCAGACTCTGAGAGAGTACTTGCTCCAGAAACAGATCTCAAAAGTCAACAGGGAG
AATCGATCCTTCACTAACATCCAGGAGAAATATGGCCCGTATGTTGCAGGTGCTGTCTTCATCCTGAAGC
AGGGAGGCGCAGTGAAGTTTCAGGACAAGGAGGAATGGATCCGGCCAAATAACCGTAGCCATTTCCTCGC
CGAGATTCAGAAGTTCCAGAATGTGCCTGTGGAGGCTGTGGATGCCAGTGGCTGTGCCATCAACTACCAG
GGCCTGAGTAACCTCTTGCCCCTGAAGGAGCTGCGGTCCCTGTCCCTGCAGCGCTGCCCCAACCTGGACG
ACTGGTGCCTCAGCCGCCTCTACCTATTGGCTGGCTCACTGCAGGAGCTCTCGCTGGCTGGCTGCCCCAG
AATCTCAGAACGGGGCCTTGCCTGCCTCCACCACCTCCAGAACCTCCGCAGGCTGGACATCTCAGACCTC
CCTGCCGTGTCCCACCCAGGTCTCACTCAGATCCTGGTGGAAGAGATGTTGCCCCACTGTGAGGTCCTTG
GAGCTGACTGGGCCCAGAATCTCAAGCTGGAACCAGACAAGCAGCCTCCAGACACATCTACCCCCCTCTC
TTCCTAG

Translation (258 aa):
MAAPRAVLHLGAREWNGRARRIHGMSELVTPDSSREKKRTLLQFLSDHFQDIQTLREYLLQKQISKVNRE
NRSFTNIQEKYGPYVAGAVFILKQGGAVKFQDKEEWIRPNNRSHFLAEIQKFQNVPVEAVDASGCAINYQ
GLSNLLPLKELRSLSLQRCPNLDDWCLSRLYLLAGSLQELSLAGCPRISERGLACLHHLQNLRRLDISDL
PAVSHPGLTQILVEEMLPHCEVLGADWAQNLKLEPDKQPPDTSTPLSS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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