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Report for CCDS6462.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6462.1 Public Homo sapiens 9 RLN1 24 110 108 CCDS HistoryNCBI Gene:6013Re-query CCDS DB by CCDS ID:6462.1See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6462.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000223862.2 ENSP00000223862.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000223862.2Link to Ensembl Protein Viewer:ENSP00000223862.1Re-query CCDS DB by Nucleotide ID:ENST00000223862Re-query CCDS DB by Protein ID:ENSP00000223862
Original member Current member NCBI NM_006911.4 NP_008842.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_006911.4Link to Protein Sequence:NP_008842.1Re-query CCDS DB by Nucleotide ID:NM_006911Re-query CCDS DB by Protein ID:NP_008842Link to BLAST:NP_008842.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_008842.1 185 P04808-1 185 100% 0 0

Chromosomal Locations for CCDS 6462.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 5335251 5335597 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 5339536 5339746 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (558 nt):
ATGCCTCGCCTGTTCTTGTTCCACCTGCTAGAATTCTGTTTACTACTGAACCAATTTTCCAGAGCAGTCG
CGGCCAAATGGAAGGACGATGTTATTAAATTATGCGGCCGCGAATTAGTTCGCGCGCAGATTGCCATTTG
CGGCATGAGCACCTGGAGCAAAAGGTCTCTGAGCCAGGAAGATGCTCCTCAGACACCTAGACCAGTGGCA
GAAATTGTACCATCCTTCATCAACAAAGATACAGAAACTATAATTATCATGTTGGAATTCATTGCTAATT
TGCCACCGGAGCTGAAGGCAGCCCTATCTGAGAGGCAACCATCATTACCAGAGCTACAGCAGTATGTACC
TGCATTAAAGGATTCCAATCTTAGCTTTGAAGAATTTAAGAAACTTATTCGCAATAGGCAAAGTGAAGCC
GCAGACAGCAATCCTTCAGAATTAAAATACTTAGGCTTGGATACTCATTCTCAAAAAAAGAGACGACCCT
ACGTGGCACTGTTTGAGAAATGTTGCCTAATTGGTTGTACCAAAAGGTCTCTTGCTAAATATTGCTGA

Translation (185 aa):
MPRLFLFHLLEFCLLLNQFSRAVAAKWKDDVIKLCGRELVRAQIAICGMSTWSKRSLSQEDAPQTPRPVA
EIVPSFINKDTETIIIMLEFIANLPPELKAALSERQPSLPELQQYVPALKDSNLSFEEFKKLIRNRQSEA
ADSNPSELKYLGLDTHSQKKRRPYVALFEKCCLIGCTKRSLAKYC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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