NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS14746.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14746.1 Public Homo sapiens X RPL10 24 110 108 CCDS HistoryNCBI Gene:6134Re-query CCDS DB by CCDS ID:14746.1See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14746.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000344746.8 ENSP00000341730.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000344746.8Link to Ensembl Protein Viewer:ENSP00000341730.4Re-query CCDS DB by Nucleotide ID:ENST00000344746Re-query CCDS DB by Protein ID:ENSP00000341730
Original member Current member EBI ENST00000369817.7 ENSP00000358832.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000369817.7Link to Ensembl Protein Viewer:ENSP00000358832.2Re-query CCDS DB by Nucleotide ID:ENST00000369817Re-query CCDS DB by Protein ID:ENSP00000358832
Original member Current member NCBI NM_001303624.2 NP_001290553.1 Accepted alive Link to Nucleotide Sequence:NM_001303624.2Link to Protein Sequence:NP_001290553.1Re-query CCDS DB by Nucleotide ID:NM_001303624Re-query CCDS DB by Protein ID:NP_001290553Link to BLAST:NP_001290553.1
Original member Current member NCBI NM_001303625.1 NP_001290554.1 Accepted alive Link to Nucleotide Sequence:NM_001303625.1Link to Protein Sequence:NP_001290554.1Re-query CCDS DB by Nucleotide ID:NM_001303625Re-query CCDS DB by Protein ID:NP_001290554Link to BLAST:NP_001290554.1
Original member Current member NCBI NM_006013.5 NP_006004.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_006013.5Link to Protein Sequence:NP_006004.3Re-query CCDS DB by Nucleotide ID:NM_006013Re-query CCDS DB by Protein ID:NP_006004Link to BLAST:NP_006004.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001290553.1 214 P27635 214 100% 0 0
NP_001290554.1 214 P27635 214 100% 0 0
NP_006004.3 214 P27635 214 100% 0 0

Chromosomal Locations for CCDS 14746.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 154398520 154398542 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 154399338 154399396 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 154399487 154399594 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 154399803 154399941 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 154400464 154400626 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 154400702 154400854 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (645 nt):
ATGGGCCGCCGCCCCGCCCGTTGTTACCGGTATTGTAAGAACAAGCCGTACCCAAAGTCTCGCTTCTGCC
GAGGTGTCCCTGATGCCAAGATTCGCATTTTTGACCTGGGGCGGAAAAAGGCAAAAGTGGATGAGTTTCC
GCTTTGTGGCCACATGGTGTCAGATGAATATGAGCAGCTGTCCTCTGAAGCCCTGGAGGCTGCCCGAATT
TGTGCCAATAAGTACATGGTAAAAAGTTGTGGCAAAGATGGCTTCCATATCCGGGTGCGGCTCCACCCCT
TCCACGTCATCCGCATCAACAAGATGTTGTCCTGTGCTGGGGCTGACAGGCTCCAAACAGGCATGCGAGG
TGCCTTTGGAAAGCCCCAGGGCACTGTGGCCAGGGTTCACATTGGCCAAGTTATCATGTCCATCCGCACC
AAGCTGCAGAACAAGGAGCATGTGATTGAGGCCCTGCGCAGGGCCAAGTTCAAGTTTCCTGGCCGCCAGA
AGATCCACATCTCAAAGAAGTGGGGCTTCACCAAGTTCAATGCTGATGAATTTGAAGACATGGTGGCTGA
AAAGCGGCTCATCCCAGATGGCTGTGGGGTCAAGTACATCCCCAGTCGTGGCCCTCTGGACAAGTGGCGG
GCCCTGCACTCATGA

Translation (214 aa):
MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARI
CANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIRT
KLQNKEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFEDMVAEKRLIPDGCGVKYIPSRGPLDKWR
ALHS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH