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Report for CCDS12128.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12128.1 Public Homo sapiens 19 STAP2 24 110 108 CCDS HistoryNCBI Gene:55620Re-query CCDS DB by CCDS ID:12128.1Re-query CCDS DB by GeneID:55620See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12128.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000600324.5 ENSP00000468927.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000600324.5Link to Ensembl Protein Viewer:ENSP00000468927.1Re-query CCDS DB by Nucleotide ID:ENST00000600324Re-query CCDS DB by Protein ID:ENSP00000468927
Original member Current member NCBI NM_017720.3 NP_060190.2 Accepted alive Link to Nucleotide Sequence:NM_017720.3Link to Protein Sequence:NP_060190.2Re-query CCDS DB by Nucleotide ID:NM_017720Re-query CCDS DB by Protein ID:NP_060190Link to BLAST:NP_060190.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060190.2 449 Q9UGK3-2 449 100% 0 0

Chromosomal Locations for CCDS 12128.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 4324133 4324197 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 4324455 4324667 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 4325216 4325308 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 4325396 4325545 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 4326942 4327007 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 4327124 4327226 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 4327316 4327385 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 4328675 4328809 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 4329961 4330061 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 4332022 4332078 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 4333694 4333816 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 4333973 4334044 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 4338652 4338753 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1350 nt):
ATGGCCTCTGCCCTGAGGCCACCCCGTGTCCCCAAGCCTAAGGGTGTCCTGCCTTCACACTACTATGAGA
GCTTTCTAGAGAAGAAGGGGCCCTGTGACCGGGATTACAAGAAGTTCTGGGCAGGCCTGCAGGGTCTCAC
CATTTATTTCTACAATAGCAATCGGGACTTCCAGCACGTGGAGAAGCTCAACTTGGGAGCATTTGAGAAA
CTCACAGATGAGATTCCCTGGGGAAGCTCACGTGACCCTGGCACCCACTTCAGCCTGATTCTCCGGGATC
AGGAGATCAAGTTCAAGGTAGAGACCTTGGAGTGTCGGGAAATGTGGAAAGGCTTCATCTTAACGGTGGT
GGAGCTCCGTGTCCCGACCGACTTGACCCTGCTTCCTGGGCACCTATACATGATGTCTGAAGTCTTGGCC
AAAGAGGAGGCGCGCCGTGCACTGGAGACACCCTCGTGCTTCCTGAAGGTGAGCCGGCTGGAGGCACAAC
TGCTCCTGGAGCGCTACCCCGAGTGCGGGAACCTGCTGCTGCGGCCCAGCGGGGACGGCGCCGACGGCGT
GTCGGTCACCACGCGGCAGATGCACAACGGGACGCACGTGGTCCGGCATTACAAGGTGAAGCGGGAGGGC
CCCAAGTACGTGATCGATGTGGAACAGCCGTTCTCTTGCACCTCCCTGGACGCCGTGGTCAACTATTTCG
TGTCGCATACCAAAAAGGCGCTGGTGCCATTCCTGTTAGACGAGGACTACGAGAAGGTGCTAGGCTACGT
GGAAGCCGATAAGGAGAATGGCGAGAATGTGTGGGTGGCGCCCTCCGCTCCGGGCCCAGGTCCTGCACCC
TGCACAGGTGGCCCCAAGCCGCTGTCACCTGCGTCTAGCCAGGACAAGCTGCCCCCACTGCCCCCACTAC
CGAACCAGGAAGAGAACTACGTGACCCCCATTGGAGATGGCCCAGCTGTTGACTATGAGAACCAAGATGT
GGCTTCCTCTAGTTGGCCAGTCATCCTGAAGCCAAAGAAGTTGCCAAAGCCTCCTGCCAAGCTTCCAAAG
CCACCCGTTGGACCCAAGCCAGTAGAGAAGGGGTTTCACCATGTTGCCCAGGCTGGTCTCGAACTCCTGA
CCTCAAGTGATCCACCCACCTCAGCCTCCCAAAGTGCTGGGATTACCGGCGTGAGCCACCACACCTGGCC
TCATCTGTCTTCTCTTCCAGAGCCCAAAGTCTTTAATGGTGGCTTGGGCAGGAAGCTGCCAGTCAGTTCA
GCCCAGCCTCTCTTCCCCACAGCCGGGCTGGCAGACATGACGGCAGAGCTACAGAAGAAGCTGGAGAAGA
GGCGGGCACTGGAGCACTGA

Translation (449 aa):
MASALRPPRVPKPKGVLPSHYYESFLEKKGPCDRDYKKFWAGLQGLTIYFYNSNRDFQHVEKLNLGAFEK
LTDEIPWGSSRDPGTHFSLILRDQEIKFKVETLECREMWKGFILTVVELRVPTDLTLLPGHLYMMSEVLA
KEEARRALETPSCFLKVSRLEAQLLLERYPECGNLLLRPSGDGADGVSVTTRQMHNGTHVVRHYKVKREG
PKYVIDVEQPFSCTSLDAVVNYFVSHTKKALVPFLLDEDYEKVLGYVEADKENGENVWVAPSAPGPGPAP
CTGGPKPLSPASSQDKLPPLPPLPNQEENYVTPIGDGPAVDYENQDVASSSWPVILKPKKLPKPPAKLPK
PPVGPKPVEKGFHHVAQAGLELLTSSDPPTSASQSAGITGVSHHTWPHLSSLPEPKVFNGGLGRKLPVSS
AQPLFPTAGLADMTAELQKKLEKRRALEH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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