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Report for CCDS12944.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12944.1 Public Homo sapiens 19 ZNF667 24 110 108 CCDS HistoryNCBI Gene:63934Re-query CCDS DB by CCDS ID:12944.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12944.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000292069.10 ENSP00000292069.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000292069.10Link to Ensembl Protein Viewer:ENSP00000292069.5Re-query CCDS DB by Nucleotide ID:ENST00000292069Re-query CCDS DB by Protein ID:ENSP00000292069
Original member Current member EBI ENST00000504904.8 ENSP00000439402.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000504904.8Link to Ensembl Protein Viewer:ENSP00000439402.1Re-query CCDS DB by Nucleotide ID:ENST00000504904Re-query CCDS DB by Protein ID:ENSP00000439402
Original member Current member NCBI NM_001321356.2 NP_001308285.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001321356.2Link to Protein Sequence:NP_001308285.1Re-query CCDS DB by Nucleotide ID:NM_001321356Re-query CCDS DB by Protein ID:NP_001308285Link to BLAST:NP_001308285.1
Original member Current member NCBI NM_022103.4 NP_071386.3 Accepted alive Link to Nucleotide Sequence:NM_022103.4Link to Protein Sequence:NP_071386.3Re-query CCDS DB by Nucleotide ID:NM_022103Re-query CCDS DB by Protein ID:NP_071386Link to BLAST:NP_071386.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001308285.1 610 Q5HYK9 610 100% 0 0
NP_071386.3 610 Q5HYK9 610 100% 0 0

Chromosomal Locations for CCDS 12944.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 56441162 56442741 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 56458155 56458247 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 56460689 56460815 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 56462338 56462370 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1833 nt):
ATGCCTTCTGCACGGGGGAAATCCAAATCCAAGGCACCTATAACATTTGGGGACTTAGCCATCTACTTCT
CCCAGGAGGAGTGGGAATGGCTGAGCCCCATTCAGAAGGATTTGTATGAAGATGTCATGTTGGAGAATTA
CCGGAACCTGGTCTCGCTTGGTCTTTCCTTTCGGAGACCAAATGTGATCACCTTATTGGAGAAAGGGAAA
GCACCCTGGATGGTAGAGCCAGTAAGAAGACGCCGGGCTCCTGACTCGGGGTCTAAATGTGAGACCAAGA
AGTTACCTCCAAATCAATGCAACAAATCTGGGCAAAGCATCTGCCAGAAACTAGTTTCTGCACAACAAAA
AGCTCCTACACGAAAGAGTGGCTGCAACAAAAATTCAGTCCTAGTAAAACCTAAGAAAGGGCATTCAGGG
AAGAAACCTTTAAAATGTAATGACTGTGGTAAAACCTTTAGTCGAAGCTTCTCTCTTAAACTTCATCAGA
ACATTCATACAGGAGAGAAGCCTTTTGAATGCAGTAATTGTAGAAAAGCTTTCAGACAGATCTCATCCAT
CCTACTTCATCAGAGAATTCACAGTGGAAAGAAAAGCCATGAATGCAATAAATGTGGGGAAAGCTTCAAT
CAAAGAACAACCCTTATTCTACATATGAGAATTCATGATGGAAAGGAAATTCTTGACTGTGGGAAGGCCT
TGAGTCAATGTCAGTCTTTCAATATACATCAGAAAATTCATGTTGTTGGGAATGTCTGCCAGTGCAGAAA
GTGCGGAAAAGCCTTCAATCAGATGTCATCCCTTTTACTTCATAAGAAAATTCACAATGGAAAGAAAACA
CATAAATATAATAAATGTGGGAGAGGCTTCAAAAAGAAATCAGTCTTTGTTGTACATAAAAGAATTCATG
CTGGAGAGAAAATCCCTGAAAATGCGAAGGCCTTAAGTCAGAGTCTACAGCAAAGAAGTCACCATTTAGA
GAATCCTTTTAAATGCAGAAAATGTGGGAAATTATTTAATAGGATTTCACCCCTGATGCTTCACCAGAGA
ATTCACACTTCAGAGAAACCGTACAAATGTGATAAATGTGACAAGTTCTTCAGGCGGCTTTCAACCCTTA
TTCTGCATCTAAGAATTCATAATGGAGAAAAACTATACAGATGCAATAAATGTGAGAAGGTCTGCAATCG
GCATTCATCCCTTATTCAACATCAGAAAGTTCATACAAAGAAAAAGAAACTATTTGAGTGTAAGGAATGT
GGGAAGATGTTTTCTGGAACTGCAAACCTTAAAATACATCAGAATATTCATTCTGAAGAGAAACCTTTCA
AATGCAATAAATGTAGTAAAGTTTTCGGCCGCCAATCATTTCTTATTGAACATCAAAGAATTCATACTGG
AGAAAAACCCTACCAGTGTGAGGAATGTGGAAAAGCCTTCAGCCACCGAATATCTCTCACACGACATAAG
AGAATTCATACTGAAGATAGACCCTATGAATGTGATCAGTGTGGGAAGGCCTTCAGCCAGAGTGCACACC
TCGCCCAACATGAAAGAATTCACACTGGAGAGAAGCCATATACATGCAAAACATGTGGTAAGGCCTTTAG
TCAGCGCACATCTCTTATTCTACATGAAAGAAGTCATACTGGAGAGAAACCCTATGAATGTAATGAATGT
GGGAAGGCATTTAGCAGTGGCTCAGACCTTATTCGACATCAGAGAAGTCATTCTTCAGAGAAACCCTATG
AATGTAGTAAATGTGGGAAGGCATATAGTCGGAGTTCATCCCTGATTCGACATCAGAATACACATTCTGA
AGAAAAAGCCTAA

Translation (610 aa):
MPSARGKSKSKAPITFGDLAIYFSQEEWEWLSPIQKDLYEDVMLENYRNLVSLGLSFRRPNVITLLEKGK
APWMVEPVRRRRAPDSGSKCETKKLPPNQCNKSGQSICQKLVSAQQKAPTRKSGCNKNSVLVKPKKGHSG
KKPLKCNDCGKTFSRSFSLKLHQNIHTGEKPFECSNCRKAFRQISSILLHQRIHSGKKSHECNKCGESFN
QRTTLILHMRIHDGKEILDCGKALSQCQSFNIHQKIHVVGNVCQCRKCGKAFNQMSSLLLHKKIHNGKKT
HKYNKCGRGFKKKSVFVVHKRIHAGEKIPENAKALSQSLQQRSHHLENPFKCRKCGKLFNRISPLMLHQR
IHTSEKPYKCDKCDKFFRRLSTLILHLRIHNGEKLYRCNKCEKVCNRHSSLIQHQKVHTKKKKLFECKEC
GKMFSGTANLKIHQNIHSEEKPFKCNKCSKVFGRQSFLIEHQRIHTGEKPYQCEECGKAFSHRISLTRHK
RIHTEDRPYECDQCGKAFSQSAHLAQHERIHTGEKPYTCKTCGKAFSQRTSLILHERSHTGEKPYECNEC
GKAFSSGSDLIRHQRSHSSEKPYECSKCGKAYSRSSSLIRHQNTHSEEKA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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