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Report for CCDS44704.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44704.1 Public Homo sapiens 11 UBTFL1 24 110 108 CCDS HistoryNCBI Gene:642623Re-query CCDS DB by CCDS ID:44704.1See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)


Attributes
Inferred exon combination

Sequence IDs included in CCDS 44704.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000530464.2 ENSP00000485108.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000530464.2Link to Ensembl Protein Viewer:ENSP00000485108.1Re-query CCDS DB by Nucleotide ID:ENST00000530464Re-query CCDS DB by Protein ID:ENSP00000485108
Original member Current member NCBI NM_001143975.1 NP_001137447.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001143975.1Link to Protein Sequence:NP_001137447.1Re-query CCDS DB by Nucleotide ID:NM_001143975Re-query CCDS DB by Protein ID:NP_001137447Link to BLAST:NP_001137447.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001137447.1 393 P0CB47 393 100% 0 0

Chromosomal Locations for CCDS 44704.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 90085950 90087131 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1182 nt):
ATGGCTTTGCCTAGAAGCCAAGGCCATTGGTCCAACAAAGACATCTTGAGGTTACTGGAATGCATGGAGA
ATAATCGCCCATCTGATGACAACAGCACGTTTAGCTCAACTCAGTCACACATGGACTGGGGAAAAGTAGC
TTTTAAAAACTTTTCTGGTGAAATGTGCAGACTCAAATGGTTAGAGATTTCTTGCAACTTGAGAAAATTC
GGCACTTTGAAAGAATTAGTCCTGGAAGCTAAGAAATGTGTTAAAAAGATGAACAAAAGCCAAAAATACA
GGAACGGTCCAGACTTTCCAAAGAGGCCCCTTACTGCTTACAATCGCTTCTTCAAGGAGAGTTGGCCCCA
GTACTCCCAAATGTACCCTGGGATGAGAAGCCAGGAACTGACCAAAATCCTGTCAAAGAAATACAGGGAA
CTCCCAGAGCAGATGAAACAGAAATATATTCAGGATTTCCGGAAGGAAAAGCAAGAATTTGAGGAAAAAC
TTGCTCGATTCAGGGAAGAACACCCTGATTTAGTCCAGAAGGCCAAGAAATCTAGTGTCTCCAAGAGGAC
TCAAAACAAAGTGCAAAAGAAGTTTCAGAAAAATATTGAAGAAGTGAGGTCTCTTCCAAAAACGGATCGA
TTTTTCAAGAAGGTAAAATTTCATGGAGAGCCTCAGAAACCCCCCATGAATGGATACCACAAGTTTCACC
AAGATTCCTGGTCAAGTAAAGAGATGCAACATTTGTCAGTGAGGGAGCGCATGGTAGAGATTGGCAGACG
CTGGCAGCGCATCCCGCAGAGCCAGAAGGATCATTTTAAGAGCCAGGCTGAGGAGCTGCAGAAGCAATAC
AAGGTGAAATTGGATCTCTGGCTCAAGACTTTGTCACCTGAAAATTATGCTGCATACAAAGAATCGACCT
ATGCTAAGGGTAAGAATATGGCCATGACAGGAGGCCCGGACCCCAGGTTGAAACAAGCAGATCCACAGTC
CTCATCAGCAAAGGGTCTGCAAGAAGGGTTTGGGGAGGGGCAAGGGCTCCAGGCTGCAGGAACAGATTCA
TCACAGACTATTTGGGTAAACTGTCATGTCTCCATGGAACCAGAAGAGAACAGGAAGAAAGATAGAGAAA
AGGAAGAAAGCAGTAACTCTTCAGACTGCAGCAGTGGAGAAGAAATAGAAGTTGATGTCTGA

Translation (393 aa):
MALPRSQGHWSNKDILRLLECMENNRPSDDNSTFSSTQSHMDWGKVAFKNFSGEMCRLKWLEISCNLRKF
GTLKELVLEAKKCVKKMNKSQKYRNGPDFPKRPLTAYNRFFKESWPQYSQMYPGMRSQELTKILSKKYRE
LPEQMKQKYIQDFRKEKQEFEEKLARFREEHPDLVQKAKKSSVSKRTQNKVQKKFQKNIEEVRSLPKTDR
FFKKVKFHGEPQKPPMNGYHKFHQDSWSSKEMQHLSVRERMVEIGRRWQRIPQSQKDHFKSQAEELQKQY
KVKLDLWLKTLSPENYAAYKESTYAKGKNMAMTGGPDPRLKQADPQSSSAKGLQEGFGEGQGLQAAGTDS
SQTIWVNCHVSMEPEENRKKDREKEESSNSSDCSSGEEIEVDV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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