NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS45462.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45462.2 Public Homo sapiens 16 FBRS 24 110 108 CCDS HistoryNCBI Gene:64319Re-query CCDS DB by CCDS ID:45462.2See the combined annotation on chromosome 16 in Sequence Viewer

Public Note for CCDS 45462.1
This gene lacks full-length transcript support, and therefore this CCDS representation has an inferred exon combination based on partial transcript and RNA-seq alignments.

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 45462.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000356166.11 ENSP00000348489.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000356166.11Link to Ensembl Protein Viewer:ENSP00000348489.5Re-query CCDS DB by Nucleotide ID:ENST00000356166Re-query CCDS DB by Protein ID:ENSP00000348489
Original member Current member NCBI NM_001105079.3 NP_001098549.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001105079.3Link to Protein Sequence:NP_001098549.2Re-query CCDS DB by Nucleotide ID:NM_001105079Re-query CCDS DB by Protein ID:NP_001098549Link to BLAST:NP_001098549.2

Chromosomal Locations for CCDS 45462.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 30659519 30659977 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 30660263 30660442 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 30661180 30661215 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 30661304 30661333 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 30662420 30662468 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 30662559 30662859 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 30664215 30664516 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 30664715 30664920 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 30665035 30665079 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 30665306 30665401 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 30665638 30665706 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 30666512 30666541 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 30666919 30666990 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 30667320 30667437 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 30667542 30667622 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 30668560 30668643 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 30668772 30668979 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 30669069 30669645 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2943 nt):
ATGGAGACGGCAGCGGCCGCGGCCCCGGGTCCGGGCTGGGCAGCAGAGGGGGAGCGCCGACGGCGGCGCT
GCTCGCGCCGAGACCGAGACCGGGAGCAGCGGCGCCGCCGAGGTCCAGGCGGCGACGCGCCCCGGGCCCT
GTTGGCCGCCCCGCGCGGCTCCTCGTCCTCGTCGTCGCCGCCGCCGCCCGCCAGGCCTTGGTCGTCAGCT
TCGTCTGGAGAGCGGCCTGGGGGCCCGAGACGCCGGCGGCCCCGTCCGAGACCTCGACCCCCGCGACCCC
GAGCTCGGAAGCGGCCTGCCGGCTCGGGCAGCCGCGGGGAGGAAGAGGAGGAGGAGGAGGAGGAGGGGGG
CGCAGACGACGGCGAAGCCGAGGAGGAGCCTGAGGAGGAGGAAGAGGAGGAGGAGGACTTGATCGATGGC
TTCGCCATCGCCAGCTTCGCCACCCTCGAGGCCTTGCAGAAGGATGCATCTCTTCAGCCCCCAGAGCGAC
TGGAACATCGGCTGAAGCATTCTGGGAAGCGGAAAAGGGGGGGCTCCAGTGGGGCCACCGGGGAGCCAGG
GGACAGCTCTGATCGAGAGCCTGGCCGGCCCCCTGGGGATCGGGCCCGAAAATGGCCCAATAAGCGGAGA
AGAAAAGAGGCGTCCTCCCGTCACTCTCTGGAAGCTGGATACATATGTGACGCGGAAAGTGATCTGGACG
AGAGGGTCTCCGATGATGACCTCGACCCATCCTTTACTGTCTCAACCAGCAAAGCCTCGGGCCCCCACGG
CGCCTTCAATGGGAACTGTGAAGCAAAACTCTCCGTGGTCCCTAAAGTGTCGGGCCTGGAGCGGAGCCAA
GAACAGCCCCCGGGGCCCGACCCGCTGCTAGTGCCTTTCCCCCCAAAGGAACCACCGCCTCCACCGGTCC
CTCGGCCTCCTGTCTCACCCCCTGCACCCCTGCCGGCCACTCCCAGTCTGCCACCCCCACCCCAGCCCCA
GCTGCAGCTTCGGGTCTCACCCTTCGGCCTCCGCACTTCTCCATATGGCAGCAGCCTGGACCTCAGCACT
GGCAGCTCTTCACGGCCGCCCCCCAAGGCCCCGGCCCCTCCCGTGGCTCAGCCTCCCCCCTCATCATCCT
CTTCGTCCTCCTCCTCCTCATCTGCCTCCTCCTCGTCCGCGCAGCTCACCCACCGGCCCCCGACGCCCTC
ACTGCCCCTGCCTTTGTCCACCCACAGCTTTCCCCCTCCCGGGCTGCGGCCCCCCCCACCACCCCACCAC
CCCTCCTTGTTCTCCCCTGGCCCCACCCTGCCCCCACCCCCACCCCTGCTGCAGGTGCCAGGGCACCCTG
GGGCCTCAGCCGCTAACGCCCTTTCTGAGCAGGACCTGATCGGCCAGGACCTGAACTCTCGCTACCTGAA
TGCCCAGGGTGGCCCTGAGGTGGTGGGGGCAGGGGGCTCGGCCCGGCCCCTGGCCTTCCAGTTCCACCAG
CACAACCACCAGCACCAGCACACCCACCAGCACACCCACCAGCACTTCACCCCTTATCCCCCGGGCCTGC
TGCCACCCCACGGCCCCCACATGTTTGAGAAATATCCAGGAAAGATGGAAGGCCTTTTCCGACATAATCC
GTACACGGCCTTCCCTCCCGCAGTGCCCGGGCTGCCTCCGGGCCTCCCGCCGGCCGTCTCCTTTGGCTCC
CTGCAGGGGGCCTTCCAGCCCAAGAGCACGAACCCTGAGCTGCCACCACGACTGGGGCCGGTGCCGAGCG
GGCTCTCCCAGAAGGGGACACAGATCCCCGACCATTTCCGGCCACCTTTGAGGAAACCAGGGAAGTGGTG
TGCCATGCACGTGCGTGTGGCTTACATGATCCTGAGACACCAGGAGAAAATGAAGGGTGACTCCCACAAG
CTTGACTTTCGGAATGACCTCCTGCCCTGCCTTCCGGGGCCCTATGGGGCCCTGCCCCCTGGGCAGGAGC
TCTCCCACCCGGCCTCCCTCTTCACTGCGACTGGTGCCGTCCACGCTGCAGCCAACCCTTTCACGGCAGC
TCCCGGGGCCCACGGACCCTTCCTGAGCCCCAGCACCCACATTGATCCCTTTGGGCGTCCCACAAGCTTC
GCCTCTTTGGCTGCCCTCTCCAACGGGGCCTTTGGAGGCCTGGGCAGCCCCACATTCAACTCCGGCGCCG
TCTTTGCCCAGAAAGAAAGCCCAGGGGCCCCACCAGCCTTCGCCTCCCCACCGGACCCATGGGGCCGCCT
GCACCGCAGTCCTCTGACCTTTCCTGCCTGGGTCCGGCCCCCTGAGGCCGCCCGGACTCCAGGCTCAGAC
AAGGAGCGGCCTGTGGAGCGGAGGGAGCCCTCCATCACCAAGGAGGAGAAGGACAGGGACCTCCCCTTCT
CACGGCCCCAGCTCCGAGTTTCTCCTGCTACTCCCAAGGCCCGGGCTGGTGAGGAGGGGCCTCGGCCAAC
CAAGGAATCTGTGCGGGTAAAGGAAGAGCGGAAGGAGGAGGCTGCCGCCGCCGCTGCCGCTGCTGCTGCC
GCCGCCGCTGCCGCCGCCGCAGCAGCCACTGGGCCCCAGGGCCTTCACCTGCTGTTTGAGAGGCCCCGGC
CGCCCCCGTTTCTGGGCCCTAGCCCACCAGATCGCTGTGCTGGCTTCCTGGAGCCAACCTGGTTGGCAGC
ACCCCCACGCCTGGCAAGGCCACCCCGCTTCTATGAGGCGGGTGAGGAGCTAACTGGACCCGGGGCCGTG
GCCGCTGCCCGCCTCTACGGTCTGGAACCTGCTCACCCCTTGCTCTACAGCCGCTTGGCTCCTCCACCAC
CACCTGCTGCGGCCCCGGGAACCCCTCACCTTCTCAGCAAGACCCCACCGGGAGCCCTTTTGGGGGCACC
ACCTCCGCTTGTGCCCGCCCCCCGGCCCAGTTCCCCACCTAGGGGCCCTGGCCCAGCTCGGGCTGACAGG
TGA

Translation (980 aa):
METAAAAAPGPGWAAEGERRRRRCSRRDRDREQRRRRGPGGDAPRALLAAPRGSSSSSSPPPPARPWSSA
SSGERPGGPRRRRPRPRPRPPRPRARKRPAGSGSRGEEEEEEEEEGGADDGEAEEEPEEEEEEEEDLIDG
FAIASFATLEALQKDASLQPPERLEHRLKHSGKRKRGGSSGATGEPGDSSDREPGRPPGDRARKWPNKRR
RKEASSRHSLEAGYICDAESDLDERVSDDDLDPSFTVSTSKASGPHGAFNGNCEAKLSVVPKVSGLERSQ
EQPPGPDPLLVPFPPKEPPPPPVPRPPVSPPAPLPATPSLPPPPQPQLQLRVSPFGLRTSPYGSSLDLST
GSSSRPPPKAPAPPVAQPPPSSSSSSSSSSSASSSSAQLTHRPPTPSLPLPLSTHSFPPPGLRPPPPPHH
PSLFSPGPTLPPPPPLLQVPGHPGASAANALSEQDLIGQDLNSRYLNAQGGPEVVGAGGSARPLAFQFHQ
HNHQHQHTHQHTHQHFTPYPPGLLPPHGPHMFEKYPGKMEGLFRHNPYTAFPPAVPGLPPGLPPAVSFGS
LQGAFQPKSTNPELPPRLGPVPSGLSQKGTQIPDHFRPPLRKPGKWCAMHVRVAYMILRHQEKMKGDSHK
LDFRNDLLPCLPGPYGALPPGQELSHPASLFTATGAVHAAANPFTAAPGAHGPFLSPSTHIDPFGRPTSF
ASLAALSNGAFGGLGSPTFNSGAVFAQKESPGAPPAFASPPDPWGRLHRSPLTFPAWVRPPEAARTPGSD
KERPVERREPSITKEEKDRDLPFSRPQLRVSPATPKARAGEEGPRPTKESVRVKEERKEEAAAAAAAAAA
AAAAAAAAATGPQGLHLLFERPRPPPFLGPSPPDRCAGFLEPTWLAAPPRLARPPRFYEAGEELTGPGAV
AAARLYGLEPAHPLLYSRLAPPPPPAAAPGTPHLLSKTPPGALLGAPPPLVPAPRPSSPPRGPGPARADR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH