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Report for CCDS14675.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14675.1 Public Homo sapiens X SPANXD 24 110 108 CCDS HistoryNCBI Gene:64648Re-query CCDS DB by CCDS ID:14675.1See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14675.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000370515.3 ENSP00000359546.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000370515.3Link to Ensembl Protein Viewer:ENSP00000359546.3Re-query CCDS DB by Nucleotide ID:ENST00000370515Re-query CCDS DB by Protein ID:ENSP00000359546
Original member Current member NCBI NM_032417.4 NP_115793.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032417.4Link to Protein Sequence:NP_115793.1Re-query CCDS DB by Nucleotide ID:NM_032417Re-query CCDS DB by Protein ID:NP_115793Link to BLAST:NP_115793.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_115793.1 97 Q9BXN6 97 100% 0 0

Chromosomal Locations for CCDS 14675.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 141697465 141697686 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 141698334 141698405 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (294 nt):
ATGGACAAACAATCCAGTGCCGGCGGGGTGAAGAGGAGCGTCCCCTGTGATTCCAACGAGGCCAACGAGA
TGATGCCGGAGACCTCGAGTGGGTACTCAGACCCGCAACCTGCTCCGAAAAAACTAAAAACATCTGAGTC
CTCGACCATACTAGTGGTTCGCTACAGGAGGAACTTTAAAAGAACATCTCCAGAGGAACTGGTGAATGAC
CACGCCCGAAAGAACAGAATCAACCCCCTCCAAATGGAGGAGGAGGAATTCATGGAAATAATGGTTGAAA
TACCTGCAAAGTAG

Translation (97 aa):
MDKQSSAGGVKRSVPCDSNEANEMMPETSSGYSDPQPAPKKLKTSESSTILVVRYRRNFKRTSPEELVND
HARKNRINPLQMEEEEFMEIMVEIPAK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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