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Report for CCDS47882.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
47882.1 Public Homo sapiens 8 FABP12 24 110 108 CCDS HistoryNCBI Gene:646486Re-query CCDS DB by CCDS ID:47882.1See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 47882.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000360464.6 ENSP00000353650.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000360464.6Link to Ensembl Protein Viewer:ENSP00000353650.4Re-query CCDS DB by Nucleotide ID:ENST00000360464Re-query CCDS DB by Protein ID:ENSP00000353650
Original member Current member EBI ENST00000692030.1 ENSP00000510293.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000692030.1Link to Ensembl Protein Viewer:ENSP00000510293.1Re-query CCDS DB by Nucleotide ID:ENST00000692030Re-query CCDS DB by Protein ID:ENSP00000510293
Original member NCBI NM_001105281.5 NP_001098751.1 Updated not alive Link to Nucleotide Sequence:NM_001105281.5Link to Protein Sequence:NP_001098751.1Re-query CCDS DB by Nucleotide ID:NM_001105281Re-query CCDS DB by Protein ID:NP_001098751
Current member NCBI NM_001105281.6 NP_001098751.1 Accepted alive Link to Nucleotide Sequence:NM_001105281.6Link to Protein Sequence:NP_001098751.1Re-query CCDS DB by Nucleotide ID:NM_001105281Re-query CCDS DB by Protein ID:NP_001098751Link to BLAST:NP_001098751.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001098751.1 140 A6NFH5 140 100% 0 0

Chromosomal Locations for CCDS 47882.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 81525046 81525120 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 81527020 81527121 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 81529438 81529610 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 81531243 81531315 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (423 nt):
ATGATTGACCAGCTCCAAGGAACATGGAAGTCCATTTCTTGTGAAAATTCCGAAGACTACATGAAGGAGC
TGGGTATAGGAAGAGCCAGCAGGAAACTGGGCCGTTTGGCAAAACCCACTGTGACCATCAGTACAGATGG
AGATGTCATCACAATAAAAACCAAAAGCATCTTTAAAAATAATGAGATCTCCTTTAAGCTGGGAGAAGAG
TTTGAGGAAATCACGCCAGGTGGCCACAAAACAAAGAGTAAAGTAACCTTAGATAAGGAGTCCCTGATTC
AAGTTCAGGACTGGGATGGCAAAGAAACCACCATAACGAGAAAGCTGGTGGATGGGAAAATGGTGGTGGA
AAGTACTGTGAACAGTGTTATCTGTACACGAACATACGAGAAAGTATCATCAAACTCAGTCTCAAACTCT
TAA

Translation (140 aa):
MIDQLQGTWKSISCENSEDYMKELGIGRASRKLGRLAKPTVTISTDGDVITIKTKSIFKNNEISFKLGEE
FEEITPGGHKTKSKVTLDKESLIQVQDWDGKETTITRKLVDGKMVVESTVNSVICTRTYEKVSSNSVSNS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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