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Report for CCDS93164.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
93164.1 Public Homo sapiens 22 FAM227A 24 110 108 CCDS HistoryNCBI Gene:646851Re-query CCDS DB by CCDS ID:93164.1See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)


Attributes
Inferred exon combination

Sequence IDs included in CCDS 93164.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000535113.7 ENSP00000445093.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000535113.7Link to Ensembl Protein Viewer:ENSP00000445093.1Re-query CCDS DB by Nucleotide ID:ENST00000535113Re-query CCDS DB by Protein ID:ENSP00000445093
Original member Current member NCBI NM_001013647.2 NP_001013669.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001013647.2Link to Protein Sequence:NP_001013669.1Re-query CCDS DB by Nucleotide ID:NM_001013647Re-query CCDS DB by Protein ID:NP_001013669Link to BLAST:NP_001013669.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001013669.1 570 F5H4B4-1 570 100% 0 0

Chromosomal Locations for CCDS 93164.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 38586125 38586199 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 38591435 38591540 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 38597204 38597356 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 38599764 38599921 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 38605254 38605348 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 38607389 38607476 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 38620212 38620291 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 38623172 38623279 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 38626180 38626303 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 38628238 38628342 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 38628834 38628935 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 38636451 38636597 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 38638746 38638822 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 38639655 38639724 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 38645563 38645645 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 38650027 38650168 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1713 nt):
ATGAATCACTTCAGGAAGATGGAGGTCATCAACCTCACCACCCTACCTATGATACCAGTGGATGAGCACC
TGGCTGTCTCGCTTGTCGCACGGAATACAATGGTGAAGACTGTGAGGAAGGAGTTAGAGAACAATCCACC
CTCATGCCTTATTGGCTCCATGCACCAGGTGAACCAAAAGATTGCTGACATAAATCTGCGTACCGAGCCG
TCGGCCAACAGCCTGGCAATTGAGAGATTTGAGTTGGAGAAGAAGGCTTTAAGAGAGAAAACTCGCAGCA
GTCCAGAAGACAAAGTCAAGAGACAAAGGAAATCTCAGTATTCCTGCAAAGGCTCCGAACTCAGACATGC
CAGATCTTCTGTTATAAAAAGGAAAACAGCAGATAAAAATCTGCTGGCAGAGCTGTACCAGTATTCCAAC
TTCAACAGCTCCAAGCCAAACAAGCTTCCGAATGGCGTGGACTTCTGTGACATGGTGGGCAACGTGGTCC
GGGCTGAGAGAGACTGCCTTAGTGGCAAGCATTTCTGTTCAGGTAGAGAATTAGAGAAGTTTCTCTCTTC
TTCTTCTCCAAGAGCCATCTGGCTGGATAGCTTTTGGTGGATATTTCATGAGAGGTACCAGCCAAACAAG
GAGCTCCAGAATAATCTGTTTGACCGGATAGCCCAGCACTATGCCTTACTTTTGTTTCGTGTACCCAAGT
CCCACTCTGAAGAGGCGCTCTTAAAAAGGCTGCCATCACTTCTCAGCAAAGCCGTGTACACCAGCTTCTG
TTGCTGCTTTCCACAGTCCTGGTTCGACACGCACGAATTCAAGTCTGACATCTGTAACACAATGAGCCTG
TGGATTTCAGGCACCTATCCTAGCCCACAGAGCTATGACAGCTGGGACTACTCGGAACTAGACCCAGAGC
GATTCCGCAGAGAAGAATTAATGTTGTACAGAAGAAGACTGACAAAGGGGAGAGAGTTTTCTTTGTTTGC
TGGTAAGAGAGCCTTCTCCCAGAAGCCAGCCCAGAGCAGGAAATTCTACCACCCTCAGTCTTCTAGTGCA
AATTCACCCAGTGAAAAAACCTCTTCGGCCAAGCAGAACTCAGAAAAAAGCTTACGAATGCAGAATACTG
CAAAAGAGCATCATTGTCAGACCCTGGTCTTGAAGAAACCTACGCAAGAAGTCAAGAGGATATCAGAAGC
AAGAGAATGTGAGAATATGTTTCCTAAAAAGTCGTGTGCTGCCTGCAAAAGCCCTGAGCTGACTTCAAAC
CTCTTCAACATTTATGGGAAGAGCCCTCTGATTGTGTACTTTCTCCAGAACTATGCCAGTCTGCAGCAGC
ACGGCAAGAATGTGTTGATAGTCAGAAGGGAAAAGACCACGAGCACCCCTGACTGCACCCCAACGTATAC
TGATGTCATCAGCGAGACCCTGTGCAGCATGAAGAAGCGGAAAGACAACCTCAATCAGTTGTACCAGCAT
CATTGGACTGAATGGAATTATTTTGACAAGCATCTAAAGGAGCTGCAAGACAACTTCTCCAGGGAAATGA
AGAATATTGATCCAAAAGCAGCAGATACAAAAAAGGCAAACCACATGTTCATCCCACCTTCAGCCGTCAA
TGAGGAATCACCTGACAAGAAAACTAAGGAGGGGAAAGGAGGAGAGGGAAAGAGAAGAGAAACAGAAGTT
GAACATTTCTTTCCACTCACTTCCAAGCCCTGA

Translation (570 aa):
MNHFRKMEVINLTTLPMIPVDEHLAVSLVARNTMVKTVRKELENNPPSCLIGSMHQVNQKIADINLRTEP
SANSLAIERFELEKKALREKTRSSPEDKVKRQRKSQYSCKGSELRHARSSVIKRKTADKNLLAELYQYSN
FNSSKPNKLPNGVDFCDMVGNVVRAERDCLSGKHFCSGRELEKFLSSSSPRAIWLDSFWWIFHERYQPNK
ELQNNLFDRIAQHYALLLFRVPKSHSEEALLKRLPSLLSKAVYTSFCCCFPQSWFDTHEFKSDICNTMSL
WISGTYPSPQSYDSWDYSELDPERFRREELMLYRRRLTKGREFSLFAGKRAFSQKPAQSRKFYHPQSSSA
NSPSEKTSSAKQNSEKSLRMQNTAKEHHCQTLVLKKPTQEVKRISEARECENMFPKKSCAACKSPELTSN
LFNIYGKSPLIVYFLQNYASLQQHGKNVLIVRREKTTSTPDCTPTYTDVISETLCSMKKRKDNLNQLYQH
HWTEWNYFDKHLKELQDNFSREMKNIDPKAADTKKANHMFIPPSAVNEESPDKKTKEGKGGEGKRRETEV
EHFFPLTSKP


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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