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Report for CCDS93407.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
93407.1 Public Homo sapiens 3 MINDY4B 24 110 108 CCDS HistoryNCBI Gene:646951Re-query CCDS DB by CCDS ID:93407.1See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 93407.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000465419.7 ENSP00000491923.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000465419.7Link to Ensembl Protein Viewer:ENSP00000491923.1Re-query CCDS DB by Nucleotide ID:ENST00000465419Re-query CCDS DB by Protein ID:ENSP00000491923
Original member Current member NCBI NM_001351281.2 NP_001338210.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001351281.2Link to Protein Sequence:NP_001338210.2Re-query CCDS DB by Nucleotide ID:NM_001351281Re-query CCDS DB by Protein ID:NP_001338210Link to BLAST:NP_001338210.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001338210.2 460 A8MYZ0 460 100% 0 0

Chromosomal Locations for CCDS 93407.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 150871045 150871187 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 150873187 150873367 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 150882897 150883058 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 150883700 150883772 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 150885368 150885438 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 150890320 150890385 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 150890938 150891103 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 150893324 150893415 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 150894186 150894305 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 150903249 150903416 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 150905062 150905089 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 150905327 150905439 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1383 nt):
ATGGATATGGAGGTCTTGGGCCAGGAACAAAGCTCCGAACAGCTGGATTTAGAGGAGATCTCAAGGAAAA
TTTCATTCCTTGACAAATGGAGGGAAATCTTTAGTTATCACAGGTTGGGAACCAATAATTCAACTCCTCA
GAATCATGAAGGCAACCATACATCTGCTGATGAAAATGAAGATGGAACAGGACTATCTCAGCCCAAAGGA
CAAGGACATTTGCCATCAAGTGGCCTTTGTTCTATTCCCAACCCCTCTATCATCTCTTCAAAATTGGGTG
GCTTTCCTATCTCCCTAGCAATGGCCACGAAGCTGCGGCAGATCCTGTTTGGAAACACAGTCCATGTCTT
TAGCTATAACTGGAAAAAGGCCTATTTCAGGTTCCATGATCCTTCTTCTGAACTAGCTTTCACTCTGGAA
GTGGGAAAGGGAGGGGCCCGAAGCATTCAGATGGCTGTGCAAGGATCCATCATCAAATACTTGTTGTTTA
CCAGGAAAGGAAAAGACTGTAACCTTGGCAACTTATGTGAAATAAGCAAGAAGGAGCAGGAGCAAGCCTT
GGCCGCGGCGCTTGCTGGCATCCTGTGGGCTGCAGGAGCAGCTCAGAAGGCCACCATCTGTCTTGTCACT
GAGGACATTTACGTTGCGTCGACTCCGGACTACTCTGTGGACAATTTCACTGAGCGACTCCAGCTGTTTG
AATTTTTAGAGAAAGAAGCCGCTGAGAAATTCATCTACGATCACTTACTATGTTTCAGAGGGGAAGGAAG
CCATGGTGTCATCCTGTTTCTGTACAGCCTGATCTTCTCTAGAACATTTGAAAGGCTTCAAATGGACCTA
GATGTCACCACCACTCAGCTGCTACAACCAAATGCTGGAGGCTTTCTGTGCAGGCAGGCAGTTCTGAACA
TGATTTTAACTGGAAGAGCAAGTCCCAATGTCTTCAATGGCTGTGAGGAAGGAAAGTCTCAGGAAACACT
ACATGGAGTCCTGACCCGCAGTGATGTTGGCTATTTGCAGTGGGGTAAGGATGCCTCGGAAGATGACAGA
CTCTCACAGGTGGGCAGCATGCTGAAGACTCCCAAATTACCTATTTGGCTGTGCAACATCAATGGAAATT
ACAGCATCCTTTTTTGCACAAACAGGCAGCTCTTATCAGACTGGAAAATGGAACGTCTCTTTGATCTGTA
CTTTTACAGTGGCCAACCCTCACAGAAAAAGCTTGTGCGTCTTACAATAGATACTCACTCCCATCACTGG
GAAAGAGACCAACAGGAAGAGAAACATGGACCAAGACGACGGTTTTCACCAGTGGAGATGGCAATCAGAA
CCAAGTGGAGCGAGGCCACCATCAACTGGAATGGGACCGTTCCCTTCTTCTAA

Translation (460 aa):
MDMEVLGQEQSSEQLDLEEISRKISFLDKWREIFSYHRLGTNNSTPQNHEGNHTSADENEDGTGLSQPKG
QGHLPSSGLCSIPNPSIISSKLGGFPISLAMATKLRQILFGNTVHVFSYNWKKAYFRFHDPSSELAFTLE
VGKGGARSIQMAVQGSIIKYLLFTRKGKDCNLGNLCEISKKEQEQALAAALAGILWAAGAAQKATICLVT
EDIYVASTPDYSVDNFTERLQLFEFLEKEAAEKFIYDHLLCFRGEGSHGVILFLYSLIFSRTFERLQMDL
DVTTTQLLQPNAGGFLCRQAVLNMILTGRASPNVFNGCEEGKSQETLHGVLTRSDVGYLQWGKDASEDDR
LSQVGSMLKTPKLPIWLCNINGNYSILFCTNRQLLSDWKMERLFDLYFYSGQPSQKKLVRLTIDTHSHHW
ERDQQEEKHGPRRRFSPVEMAIRTKWSEATINWNGTVPFF


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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