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Report for CCDS34460.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34460.1 Public Homo sapiens 6 MRPL14 24 110 108 CCDS HistoryNCBI Gene:64928Re-query CCDS DB by CCDS ID:34460.1See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34460.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000372014.5 ENSP00000361084.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000372014.5Link to Ensembl Protein Viewer:ENSP00000361084.3Re-query CCDS DB by Nucleotide ID:ENST00000372014Re-query CCDS DB by Protein ID:ENSP00000361084
Original member Current member NCBI NM_001318767.2 NP_001305696.1 Accepted alive Link to Nucleotide Sequence:NM_001318767.2Link to Protein Sequence:NP_001305696.1Re-query CCDS DB by Nucleotide ID:NM_001318767Re-query CCDS DB by Protein ID:NP_001305696Link to BLAST:NP_001305696.1
Original member Current member NCBI NM_001318768.2 NP_001305697.1 Accepted alive Link to Nucleotide Sequence:NM_001318768.2Link to Protein Sequence:NP_001305697.1Re-query CCDS DB by Nucleotide ID:NM_001318768Re-query CCDS DB by Protein ID:NP_001305697Link to BLAST:NP_001305697.1
Original member Current member NCBI NM_032111.4 NP_115487.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032111.4Link to Protein Sequence:NP_115487.2Re-query CCDS DB by Nucleotide ID:NM_032111Re-query CCDS DB by Protein ID:NP_115487Link to BLAST:NP_115487.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001305696.1 145 Q6P1L8 145 100% 0 0
NP_001305697.1 145 Q6P1L8 145 100% 0 0
NP_115487.2 145 Q6P1L8 145 100% 0 0

Chromosomal Locations for CCDS 34460.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 44113843 44114209 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 44116541 44116611 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (438 nt):
ATGGCTTTCTTTACTGGGCTCTGGGGCCCCTTCACCTGTGTAAGCAGAGTGCTGAGCCATCACTGTTTCA
GCACCACTGGGAGTCTGAGTGCGATTCAGAAGATGACGCGGGTACGAGTGGTGGACAACAGTGCCCTGGG
GAACAGCCCATACCATCGGGCTCCTCGCTGCATCCATGTCTATAAGAAGAATGGAGTGGGCAAGGTGGGC
GACCAGATACTACTGGCCATCAAGGGACAGAAGAAAAAGGCGCTCATTGTGGGGCACTGCATGCCTGGCC
CCCGAATGACCCCCAGATTCGACTCCAACAACGTGGTCCTCATTGAGGACAACGGGAACCCTGTGGGGAC
ACGAATTAAGACACCCATCCCCACCAGCCTGCGCAAGCGGGAAGGCGAGTATTCCAAGGTGCTGGCCATT
GCTCAGAACTTTGTGTGA

Translation (145 aa):
MAFFTGLWGPFTCVSRVLSHHCFSTTGSLSAIQKMTRVRVVDNSALGNSPYHRAPRCIHVYKKNGVGKVG
DQILLAIKGQKKKALIVGHCMPGPRMTPRFDSNNVVLIEDNGNPVGTRIKTPIPTSLRKREGEYSKVLAI
AQNFV


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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