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Report for CCDS47744.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
47744.1 Public Homo sapiens 7 ACTR3C 24 110 108 CCDS HistoryNCBI Gene:653857Re-query CCDS DB by CCDS ID:47744.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 47744.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000252071.8 ENSP00000252071.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000252071.8Link to Ensembl Protein Viewer:ENSP00000252071.4Re-query CCDS DB by Nucleotide ID:ENST00000252071Re-query CCDS DB by Protein ID:ENSP00000252071
Original member Current member EBI ENST00000683684.1 ENSP00000507618.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000683684.1Link to Ensembl Protein Viewer:ENSP00000507618.1Re-query CCDS DB by Nucleotide ID:ENST00000683684Re-query CCDS DB by Protein ID:ENSP00000507618
Original member Current member NCBI NM_001164458.2 NP_001157930.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001164458.2Link to Protein Sequence:NP_001157930.1Re-query CCDS DB by Nucleotide ID:NM_001164458Re-query CCDS DB by Protein ID:NP_001157930Link to BLAST:NP_001157930.1
Original member Current member NCBI NM_001164459.2 NP_001157931.1 Accepted alive Link to Nucleotide Sequence:NM_001164459.2Link to Protein Sequence:NP_001157931.1Re-query CCDS DB by Nucleotide ID:NM_001164459Re-query CCDS DB by Protein ID:NP_001157931Link to BLAST:NP_001157931.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001157930.1 210 Q9C0K3-1 210 100% 0 0
NP_001157931.1 210 Q9C0K3-1 210 100% 0 0

Chromosomal Locations for CCDS 47744.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 150248986 150249054 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 150284753 150284845 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 150286367 150286540 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 150289450 150289593 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 150293312 150293419 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 150295252 150295296 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (633 nt):
ATGTTCGAATCATTTAACGTTCCAGGACTCTACATTGCAGTTCAGGCAGTGCTGGCCTTGGCGGCATCTT
GGACATCTCGACAAGTGGGTGAACGTACATTAACGGGGATAGTCATTGACAGCGGAGATGGAGTCACCCA
TGTTATCCCAGTGGCAGAAGGTTATGTAATTGGAAGCTGCATCAAACACATCCCGATTGCAGGTAGAGAT
ATTACGTATTTCATTCAACAGCTGCTAAGGGAGAGGGAGGTGGGAATCCCTCCTGAGCAGTCACTGGAGA
CCGCAAAAGCCATTAAGGAGAAATACTGTTACATTTGCCCCGATATAGTCAAGGAATTTGCCAAGTATGA
TGTGGATCCCCAGAAGTGGATCAAACAGTACACGGGTATCAATGCGATCAACCAGAAGAAGTTTGTTATA
GACGTTGGTTACGAAAGATTCCTGGGACCTGAAATATTCTTTCACCCGGAGTTTGCCAACCCAGACTCTA
TGGAGTCCATCTCAGATGTTGTTGATGAAGTAATACAGAACTGCCCCATCGATGTGCGGCGTCCGCTGTA
TAAGATGGAACAAATTCCACTGAGCTATCCTCAAGGTCACGGATTCCATCCTCTGTCACCTCCATTTCAT
TGA

Translation (210 aa):
MFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRD
ITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYICPDIVKEFAKYDVDPQKWIKQYTGINAINQKKFVI
DVGYERFLGPEIFFHPEFANPDSMESISDVVDEVIQNCPIDVRRPLYKMEQIPLSYPQGHGFHPLSPPFH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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