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Report for CCDS72906.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
72906.1 Public Homo sapiens 1 CIART 24 110 108 CCDS HistoryNCBI Gene:148523Re-query CCDS DB by CCDS ID:72906.1Re-query CCDS DB by GeneID:148523See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 72906.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000369094.5 ENSP00000358090.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000369094.5Link to Ensembl Protein Viewer:ENSP00000358090.1Re-query CCDS DB by Nucleotide ID:ENST00000369094Re-query CCDS DB by Protein ID:ENSP00000358090
Original member Current member NCBI NM_001300839.2 NP_001287768.1 Accepted alive Link to Nucleotide Sequence:NM_001300839.2Link to Protein Sequence:NP_001287768.1Re-query CCDS DB by Nucleotide ID:NM_001300839Re-query CCDS DB by Protein ID:NP_001287768Link to BLAST:NP_001287768.1
Original member Current member NCBI NM_001300840.2 NP_001287769.1 Accepted alive Link to Nucleotide Sequence:NM_001300840.2Link to Protein Sequence:NP_001287769.1Re-query CCDS DB by Nucleotide ID:NM_001300840Re-query CCDS DB by Protein ID:NP_001287769Link to BLAST:NP_001287769.1
Original member Current member NCBI NM_001300841.2 NP_001287770.1 Accepted alive Link to Nucleotide Sequence:NM_001300841.2Link to Protein Sequence:NP_001287770.1Re-query CCDS DB by Nucleotide ID:NM_001300841Re-query CCDS DB by Protein ID:NP_001287770Link to BLAST:NP_001287770.1

Chromosomal Locations for CCDS 72906.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 150283532 150283633 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 150283805 150283880 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 150284426 150284504 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 150284597 150284708 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 150286430 150286954 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (894 nt):
ATGGCAGGATCTGGGGCGAAAAGATCAAGAGATGGTGAACTGGAGACCAGTCTAAACACCCAAGGTTGTA
CCACAGAGGGAGACCTGCTGTTTGCCCAGAAGTGTAAAGAACTCCAAGGATTTATACCTCCTCTCACAGA
CCTACTCAATGGGCTGAAGATGGGTCGTTTTGAGAGAGGATTAAGCAGTTTTCAGCAGAGTGTGGCAATG
GACAGGATCCAGCGTATTGTAGGTGTTTTGCAGAAGCCACAGATGGGGGAACGTTACCTAGGAACCTTGC
TACAGGTAGAAGGGATGTTAAAGACTTGGTTTCCACAAATAGCTGCCCAGAAGTCATCATTGGGTGGTGG
CAAGCATCAGCTGACCAAGCATTTTCCAAGCCACCACAGTGATTCAGCTGCTTCCTCTCCTGCATCTCCT
ATGGAAAAGATGGACCAGACACAGCTAGGACATCTAGCTTTAAAACCAAAGCAGCCTTGGCACCTCACAC
AATGGCCAGCTATGAACCTCACCTGGATCCACACCACTCCAATTTGCAACCCCCCTCTCAGCTCCCCAGG
TACTATCTCCTTTAGCCATGGTCCTTTAGGCACTGGAACCGGCATTGGCGTCATTCTTTTCCTCCAGCAT
GGAGTGCAACCCTTCACCCACTCTGCCCCAACCACCCCAGTCCCACCTACTACAGCATCTCCTGTCATCC
CTGGTGAGCCTATGAAACTATCTGGAGAGGGTCCTCGTTGCTACAGTTTGCCAGTAACTCTGCCATCAGA
CTGGAGCTATACCCTATCCCCTCCCAGTCTACCCACCTTGGCCAGAAAGATGACCATAGGACACCGGGAG
CAGCAGAGAAGCCATCCTCCAGTTGCTGCTGATGCTCATCTTCTCAACCTCTAG

Translation (297 aa):
MAGSGAKRSRDGELETSLNTQGCTTEGDLLFAQKCKELQGFIPPLTDLLNGLKMGRFERGLSSFQQSVAM
DRIQRIVGVLQKPQMGERYLGTLLQVEGMLKTWFPQIAAQKSSLGGGKHQLTKHFPSHHSDSAASSPASP
MEKMDQTQLGHLALKPKQPWHLTQWPAMNLTWIHTTPICNPPLSSPGTISFSHGPLGTGTGIGVILFLQH
GVQPFTHSAPTTPVPPTTASPVIPGEPMKLSGEGPRCYSLPVTLPSDWSYTLSPPSLPTLARKMTIGHRE
QQRSHPPVAADAHLLNL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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